Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01218 ATGGGACTTCGTTGCTCTAAGTTCTCACTATGCTGGTGGTCTTCACATGTCAAACCAAATCTTCATCCCTCCTCTGATATGGATGATGATGGCAAGAATGCGAAGGATTCATTGCCTGGGTTCAGAGAGTTCAGCTTGAATCAGCTTAGAGAAGCTACTTGTGGATTTTCCGCAGACAACATTGTCTCAGAGCATGGCGAGAAAGCCCCCAATGTTGTTTACAAAGGAAAGCTTGAAGGTGATGATTGGTGGGTTGCAGTTAAGCGCTTCAACAGGTCAGCTTGGCCTGATCCTAGACAGTTCTTGGAGGAGGCAAGAGCTGTTGGGCAGTTGAGGAATGAGAAGCTGGCTAATCTGATTGGATGTTGCTGTGAAGGTGAAGAGCGATTACTCGTTGCAGAGTTCATGCCTAATGAAACTCTTTCTAAGCATCTTTTCCATTGGGAGACTCAACCCATGAAATGGTCAATGAGGCTGAGAGTAGCTCTGTATATGGCTCAAGCATTGGAGTATTGCAGTAGTAGAGGGAGGGCATTGTACCACGATCTTAATGCGTACAGAATTCTCTTTGATCAGGATGGAAATCCAAGGCTATCTTGCTTTGGACTCATGAAGAACAGCAGAGATGGCAAGAGCTACAGTACAAATTTAGCTTTCACTCCTCCAGAGTACTTGAGAACAGGAAGAGTTACCCCAGAAAGTGTGGTTTACAGTTTGGGTACTCTCCTACTTGATCTTCTCAGTGGCAAACATATTCCTCCGAGCCATGCACTTGATCTGATACGTGGAAAAAACTTTCAGATGCTGATGGATTCATGTTTGGAAGGTCATTTCTCAAATGATGATGAAACTGAGTTAGTAAGGTTAGCTTCACGTTGTCTGCAATATGAAGCCCGTGAGAGGCCAAATGCTAAGTCTCTTGCAGCTGCTCTAACTCCACTTCAAAAGGAAACTGGTGTCCCGTCATATGTATTATTGGGCATACCTCATGCAAGTAAATTGTCTGAGCCAAAGGTTTCGTTAACACCTCTAGCTGAAGCTTGTTCAAGAGGGGATCTCACAGCAATTCATGAAAGTCTGGAAAAGGTGGGATATAAGGATGATGATGGAGTTGCAAACGAGCTTTCATTCCAAATGTGGACAAATCAAATACAAGAAACACTAAATTCTAAGAAGCGTGGAGACTCAGCTTTTCAAGCTAAGGACTTCTCTACAGCCATTGACTGCTACACACTATTCATTGATGGAGGGACCATGATATCGCCTACTGTGTATGCCAGGCGATGCCTATGCTATCTCATGATTGATCTGCCTCAAGAAGCTCTTGCCGATGCTATGCAAGCTCAAATAGTATCCCCCGAGTGGCCAACTGCATTTTATCTTCAAGCCGCCGCCTTATTCAGCCTTGGAATGAATAATGACGCAATAGAAAGTCTGAAAGATGGTACATCACTTGAAGCAAAAAAACATAGAAACTGA 1479 0.4388 MGLRCSKFSLCWWSSHVKPNLHPSSDMDDDGKNAKDSLPGFREFSLNQLREATCGFSADNIVSEHGEKAPNVVYKGKLEGDDWWVAVKRFNRSAWPDPRQFLEEARAVGQLRNEKLANLIGCCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWSMRLRVALYMAQALEYCSSRGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSLGTLLLDLLSGKHIPPSHALDLIRGKNFQMLMDSCLEGHFSNDDETELVRLASRCLQYEARERPNAKSLAAALTPLQKETGVPSYVLLGIPHASKLSEPKVSLTPLAEACSRGDLTAIHESLEKVGYKDDDGVANELSFQMWTNQIQETLNSKKRGDSAFQAKDFSTAIDCYTLFIDGGTMISPTVYARRCLCYLMIDLPQEALADAMQAQIVSPEWPTAFYLQAAALFSLGMNNDAIESLKDGTSLEAKKHRN* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01218 492 Gene3D Tetratricopeptide repeat domain 385 492 IPR011990 GO:0005515
Pte15g01218 492 SUPERFAMILY Protein kinase-like (PK-like) 39 316 IPR011009 -
Pte15g01218 492 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Pte15g01218 492 Gene3D Transferase(Phosphotransferase) domain 1 137 327 - -
Pte15g01218 492 FunFam probable serine/threonine-protein kinase At5g41260 137 328 - -
Pte15g01218 492 ProSiteProfiles Protein kinase domain profile. 59 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01218 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 491 IPR045845 GO:0004672|GO:0009742
Pte15g01218 492 Gene3D Phosphorylase Kinase; domain 1 30 135 - -
Pte15g01218 492 FunFam probable serine/threonine-protein kinase At4g35230 385 492 - -
Pte15g01218 492 FunFam probable serine/threonine-protein kinase At4g35230 31 135 - -
Pte15g01218 492 SUPERFAMILY TPR-like 391 485 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01218 Pte-Chr15 9299299 9302679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01218 28 337 Glycoside Hydrolase AT3G07070 32.047 8.21e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte15g01218 PK_Tyr_Ser-Thr 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01218 - - cit:102623004 838.95