Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01211 ATGGGTGAGGAGGTCGAGATGACTGAATATGAAACTCCCGGTGGTGAAAGTGGCTGCGGGACCCACGAAGAGCGCGTTTTGGAGTGGGAGGTAGGTCTTCCCAGTGCTGATGATCTTACTCCTCTGTCTCAAAGTTTGATCCCACCGGAACTTGCGACTGCTTTCAGTATCTCGCCGGTACCGTGCCGTACGGCTCAAGATGTGGATCGTGCTTCACAGAATACTTTGTCTTCTATTCGTGGTGGAAATTCGCAGGCCTTCTCTTCCAATAATTTCAAAACTTTTCATGGTGATGAGAGTCGTGACCCGATGGTTTTGGAAGCCGAAGAGGTTGACCGAGATGGATCTGCTTCGGATTCTAGGAAATTAAGGAAGCTTGATTCCGTTGAAGAAGCTGATTCAGCTTTACGAACTGAGAATGCTACTGACGATCCATCTGCCAAGACCCTGAAGCGGCCTCGGCTTGTATGGACTCCGCAGCTCCACAAGAGATTTGTTGATGTCGTAGCTCATCTGGGCATTAAAAACGCTGTGCCAAAAACGATTATGCAGATGATGAATGTTGAAGGATTGACCAGAGAAAACGTTGCCAGTCATCTGCAAAAGTATAGGCTTTACTTGAAGAGAATGCAGGGGTTGTCAAACGACGGTCCGTCCACGTCCGACCAACTCTTTGCCTCCACGCCAGTGCCTCAGAGCTTGCATGAGTCAAGTGGAAGTGGACATGGTCATGGAAACGGTCATATGCCTATGTCAATTCCCATGCCTTATCATCCTCCTATGAATATGATGCCAATGCCGATTCTCGGTAGTTTCGGTCACGCGCAGATGGGAATGCAGGTGGGTACTCCTAATGGCAGGTCAGGGTACCAGGGGCTTGAATCTCATCAGTACAATATGATGCAGCAAAGGGATTCACGTTGCTCCTAA 930 0.4892 MGEEVEMTEYETPGGESGCGTHEERVLEWEVGLPSADDLTPLSQSLIPPELATAFSISPVPCRTAQDVDRASQNTLSSIRGGNSQAFSSNNFKTFHGDESRDPMVLEAEEVDRDGSASDSRKLRKLDSVEEADSALRTENATDDPSAKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQMMNVEGLTRENVASHLQKYRLYLKRMQGLSNDGPSTSDQLFASTPVPQSLHESSGSGHGHGNGHMPMSIPMPYHPPMNMMPMPILGSFGHAQMGMQVGTPNGRSGYQGLESHQYNMMQQRDSRCS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01211 309 Pfam Myb-like DNA-binding domain 156 204 IPR001005 -
Pte15g01211 309 MobiDBLite consensus disorder prediction 214 240 - -
Pte15g01211 309 MobiDBLite consensus disorder prediction 1 22 - -
Pte15g01211 309 FunFam Two-component response regulator 148 211 - -
Pte15g01211 309 MobiDBLite consensus disorder prediction 214 250 - -
Pte15g01211 309 NCBIfam myb-like DNA-binding domain, SHAQKYF class 153 205 IPR006447 GO:0003677
Pte15g01211 309 MobiDBLite consensus disorder prediction 95 148 - -
Pte15g01211 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 208 IPR017930 -
Pte15g01211 309 SUPERFAMILY Homeodomain-like 149 209 IPR009057 -
Pte15g01211 309 MobiDBLite consensus disorder prediction 71 148 - -
Pte15g01211 309 Gene3D - 149 211 - -
Pte15g01211 309 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 291 IPR044841 GO:0003700|GO:0006355
Pte15g01211 309 MobiDBLite consensus disorder prediction 71 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01211 Pte-Chr15 9242738 9245143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01211 1 280 G2-like Transcription Factor Family AT3G46640 56.610 6.39e-88 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g01211 Myb_DNA-binding 5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01211 - - qsa:O6P43_028203 451.825