Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01197 ATGGGAAAGCACTTGCTTAAGAAGCAGCAAGGAGTTCATTTCAACGACAATAGTCTAGGCTGCATGTGGGGTATATTTCATATTCTAGACTACCACCATTGGCGCCATGTCAAGAAAATGTTTCCTCATGGATGGCATCATGACAGAAGACATGCCAGATATGCGAGAAAAAAGATTCTAGGAAACTATATTGATGAAGCACTAGACTCTGGGAATGATGAGTTGGAGCCGCTTCTGGTCAGACAAGTTAAACCAATAGTGAAATCTCCAGACAAGTCTTCCAAAAGACATCAGGATGTGTCTGTTGGAATGCATTTATTTTGTCCAAAACATTTTCTAGAGCATTCAAACTATTGTGTTCGTTGTTCAAGCAACGATCGAAACAACACCAATTCCACAAACAGAAGGCACATCTGTTCTCAATCAAAGACAGAAGAACGGCTAGGCGCCAATCGCAAGGGCAGATATTATTCTAGGAACACCATGAATTTTGATCAGGATCATCAACATGTTTGGAATGCCATACTTCCCGTGGACAAGGATACAAAATTACTAACAGGTTATCATAAGCTCGTGGAACCAAACAAGCACAATGAAGAAATTTCTAATAAGCTTGAGGAATATAGAGATTTTCTGGAAGTACCAAAGGTTAAGAAGGATATATTCCTCAGGATTCTTCAAGATCTGGATGTAAATAAGAAAACATCCCATCTTCTGCAGGCGTCAAACTCAAATGCCAAGTTGATGAAATCAGTGTCATATCCAGTGTCCAGATCATCTTGCTCACGCATGAAAGATAAACATGTCAGTATGCTCAAACACAAACACACTGAAATTTGGGTTCTTCCCAAGGGAGAGCAACTGAATATTGCTTCACATGCAGACATTTCCTCCAATGATGCTCAGGATAATGTACAACCTGTGCTTGCAGTAAATGATAACAGTGTTGTTGCTAGTATAAGGGCTAGAAGAATACACAAGTTCTTCTTGGGGACTTCTTTAGGATTAAACCATCAAAACTGGAATCAAATGGTTGTTCATCGTTTTAAAATAGTGAAGCAGAAAATAAAGCATGCACTCATGGAGTTCAAGAAAGATAGAAGACAAAATTCAGCTGAAGAAATTGACCAGAAAATCTTTAACGAATGTAGGCTTAAAAATGCACAAGAGGCAGCTGAATCTATAAATGATGGCAACAGCCAAGAATGCAAAGAGTCTGCAGATAATTTTTGCAGTTCCGATGAGATTTGGGATTCTGATCTAAGCAAACAGAAAGCTTCCTCTTTCAGAAGACCTAGCTTTCTGAATGACTCACTGGATAGATATACTGAACTATTTGAGAGAAGTTTTGGAAAAGACAAAAGGTGGCATAACTCAAAGTCAAAAAGCTTAAAACTGATAAATGAAGATAATGATCAGATGAGCAGCTCTGATTCAAAGTCACGCAGAAGAAATATTTCTCTGCCTGACCTTGATCTCTTGTACTTCTTTCTATATGAACTGACTTTTCGTGGCCATGACTCGTCAATGCCAGTGAAGACTTCTCTTGATAATGGTCATGAGCCATTGGTGCCAGCGAGAAATTCTGCAGATTGTCCCACAAATTCAGTAAGGCTATCAGTCAATACCGATGAACCAGTGGATGTGATTGTAGAGACTGGCCATCAGAATGCAGACAGAGAAAGCAGTCAGAGCAACATGAGTTTCCGTTCTTCATATGTTCTAGATATGGTGGAATTAGAATGCAATGAGGGAATTGCAGATGCCTGTGATGATCTGAGGGATGATAAGCATGTGGAAGAAGCAGTGACTGGCAGTCTTCAACAAGCAAATAAGGAAATAGAACGCATTATACCTTGTACAGAACTAATTGAACAAGCACAAAAAGCAGTTGCCTTTGAGAATGAGCATCAAGAGAGCTGCACCATTTACAAGGAAGACAGAGGAAGTATACATTCTTTTGTGGACTTGACATACCAGAGAACCAACCTTGAGGATATTCAAAATGCAAGCAAGTGTCAGGAAGAACATTCTCTGAGTTCTAAATTTGATTTTAAGGATGGCTTCGACTTCAAATGTACTGGGGATGAGCTTTCAGGGACATGGAACATCACAAAGGACCCACTTAATCAGTCACGGCTCAGAGAAGTTCAGGCCCTTTTGGTCAATGAATATGAATTCTTAGGAGACAATATTGGCTACCCACTTCAACCGCTTCTCATCGATTTACTCAACGAGGTCCTCCTTGATATGCAAGAGAGACTGTCCACTCCATTCCCGAGGCCCCTGTCATCCAACTGTAGGGTTCGTCCCATTCCAAAAGGTCACCGTCTTCTTGAGGAAGTTTGGACGAGACTAAACTGGTACCTAAGGTTGAGACCGGAGCAGGACCAATCGCTGGATGATGTTGTAGGACGAGATTTGGCGGAAGATTCATGGATGAAGCTCAAATCGGAAATCGAGTGTGTAACAGTGGAGCTAGAGGACATGATCTTCCAGGAATTATTTGATGAATTCAATTGTGCTCGAGGTTACTGTCTGAAACTCTTCTAA 2553 0.4066 MGKHLLKKQQGVHFNDNSLGCMWGIFHILDYHHWRHVKKMFPHGWHHDRRHARYARKKILGNYIDEALDSGNDELEPLLVRQVKPIVKSPDKSSKRHQDVSVGMHLFCPKHFLEHSNYCVRCSSNDRNNTNSTNRRHICSQSKTEERLGANRKGRYYSRNTMNFDQDHQHVWNAILPVDKDTKLLTGYHKLVEPNKHNEEISNKLEEYRDFLEVPKVKKDIFLRILQDLDVNKKTSHLLQASNSNAKLMKSVSYPVSRSSCSRMKDKHVSMLKHKHTEIWVLPKGEQLNIASHADISSNDAQDNVQPVLAVNDNSVVASIRARRIHKFFLGTSLGLNHQNWNQMVVHRFKIVKQKIKHALMEFKKDRRQNSAEEIDQKIFNECRLKNAQEAAESINDGNSQECKESADNFCSSDEIWDSDLSKQKASSFRRPSFLNDSLDRYTELFERSFGKDKRWHNSKSKSLKLINEDNDQMSSSDSKSRRRNISLPDLDLLYFFLYELTFRGHDSSMPVKTSLDNGHEPLVPARNSADCPTNSVRLSVNTDEPVDVIVETGHQNADRESSQSNMSFRSSYVLDMVELECNEGIADACDDLRDDKHVEEAVTGSLQQANKEIERIIPCTELIEQAQKAVAFENEHQESCTIYKEDRGSIHSFVDLTYQRTNLEDIQNASKCQEEHSLSSKFDFKDGFDFKCTGDELSGTWNITKDPLNQSRLREVQALLVNEYEFLGDNIGYPLQPLLIDLLNEVLLDMQERLSTPFPRPLSSNCRVRPIPKGHRLLEEVWTRLNWYLRLRPEQDQSLDDVVGRDLAEDSWMKLKSEIECVTVELEDMIFQELFDEFNCARGYCLKLF* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01197 850 PANTHER PROTEIN TRM32 1 841 IPR044257 -
Pte15g01197 850 Pfam Domain of unknown function (DUF4378) 695 838 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01197 Pte-Chr15 9139409 9144265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01197 739 832 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 50.000 9.86e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01197 - - qsa:O6P43_028234 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01197 15 9139409 9144265 Pte15g01197 15 9139409 9144265 RCT