Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01196 ATGGGTAACGGTGTTGGAAAATTCTGCGTGTGTTTCATCGGGGACCGAGGCGACCATCGGAAGCATGACCTATCCGTTTTGATATCAGACCCACTTGATGAGGGCATAGGCCATTCTTTCTGCTACGTTAGGCCCGACCCGTGTTCTATTTCTTCTTCTAAAGATTACTTCGAGGAGACCACCACTTTCCGAACTATCTCCGGTGCTTCTGTGAGTGCTAACACTTCCACTCCTCTCTCTACGTCTTTTGTGGATTTGTATTCTTTCAATAGTTTCGACAGACCTGCGGCTTTTGAGAGCTCTACTTCTTTTGCTTCTCTCCCTCTCCAACCAATACCTCGGAATTTGGTGAACTCTGATCTATTCTCAGGAAATCTGATCGGTGTACCAGTTTCAGGGCCACTTGAGAGAGGGTTCTTATCGGGTCCGATTGAGCGTGGATTTATGTCAGGTCCACTAGAGAATGGTGGCTTGTTCTCTGGTCCAATGGAAAAGGGCAGCTCCGACCAGTTTCAGAGAAGCTTCTCTCATGGCGGTTTTGCTTTAAGACCCAGATCGAGAAAAGGGAGGTGGATGAAATTTCTTGAGGAAGTGATATCGAAAACCTTATCTCATGGACACAACGCGATTGTCACTCCCATTAAAAGCATCCCTATGGTGAAAGAACCTGAGTGGATGGTTAGGTTAGAGAAGCACAATGAGAATTTGACTGTGAGCAGTGTGAATTTCAGCAGTGAAGGCAGCTTAGAGGATGATGATTCGATGGAAAGTCACAATCTTCAATGGGCTCAAGGAAAAGCAGGTGAAGATCGTGTCCATATTGTTGTTTCAGAGGAGCACGGTTGGGTTTTTGTTGGGATTTACGATGGATTCAACGGTCCTGATGCACCGGATTACCTTCTCTCCAATCTCTACCCTGCTGTGCACAAAGAGCTCAAAGGTTTGTTGTGGGATGACAAGCTTGAGCACTCGTCGGAGGCGGTGACCTATGCCACATCCCTTGTTCCATCTGAAAAATCTAATTTTGAAAAGAACTACGGTGCGCAGGCTTGTCACCATAGTGATATGAGCAATATGGAGGTTGATGATTATTCTCAATGTGGTGTTGTTGAAGAGGTTGATTCAGATTCAAAGAGACAGGGAGGTCACAATTCCAACTATAAGGGAGCAGCAAAAAAATGGGAGGAGAATCATAGGAGGTGGAAGTGTGAATGGGATCGAGAAAGATTAGAACTTGACAGAAGATTGAAGGAACAGCTAAATCGACAAAGATCAGATAGTACCAATGCTATTAATCATTCTGAGGTACTGCAAGCACTTTCTCGTGCGCTGAGGAAAACAGAAGAGTCTTATCTAGACATCGCTGATAAGATGGTCATGGAAAATCCTGAGCTAGCTTTGATGGGTTCTTGTGTGCTTGTAATGTTGATGAAAGGAGATGATGTTTATTTTATGAATGTTGGTGACAGCAGAGCTGTTTTGGCTCAGAAGGTAGAGCCTGATTATTGGTTAGGGAAGATTCGTCAGGATCTGCGGAAAATCAATGAAGAGACAATGAATGATCTTGAATCGTCGTTTTGTCAGAGAACAAACTCGCTGATTACTAGAATCTGGTTTCTGTATCAGGAAGTTCAAAGAATTAGAAGCGAACACCCCGATGATCCTTGTGCTGTAATGAATGATCGAGTGAAGGGTTCCTTAAAGGTTACACGGGCTTTCGGTGCTGGGTTTCTCAAACAGCCAAAGTGTAACGATGCACTTTTGAAGAGGTTCAGAATAGACTACATCGGCACTTCTCCTTACATCACTTGCTCACCGGATCTTCGCCACCACAAATTGGAATCAAAAGATAAATTTTTGATCTTGTCTTCGGATGGACTTTATCAGTACTTCACTAACAAAGAAGCCGTGGCTGAAGTTGAACTTTTCGTTGCCCTCCAACCTGAGGGAGATCCTGCACAGCATTTGGTTGAGGAACTACTATTCCGAGCTGCCAAAAGAGCTGGACTCGACTTCCATCAGTTGTTAGAAATACCGCAGGGCGATCGTCGGCGCTACCATGATGATGTTTCAATCATTGTCATTTCCTTGGATGGAAGGATATGGAGGTCTACTGTATAA 2121 0.4441 MGNGVGKFCVCFIGDRGDHRKHDLSVLISDPLDEGIGHSFCYVRPDPCSISSSKDYFEETTTFRTISGASVSANTSTPLSTSFVDLYSFNSFDRPAAFESSTSFASLPLQPIPRNLVNSDLFSGNLIGVPVSGPLERGFLSGPIERGFMSGPLENGGLFSGPMEKGSSDQFQRSFSHGGFALRPRSRKGRWMKFLEEVISKTLSHGHNAIVTPIKSIPMVKEPEWMVRLEKHNENLTVSSVNFSSEGSLEDDDSMESHNLQWAQGKAGEDRVHIVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWDDKLEHSSEAVTYATSLVPSEKSNFEKNYGAQACHHSDMSNMEVDDYSQCGVVEEVDSDSKRQGGHNSNYKGAAKKWEENHRRWKCEWDRERLELDRRLKEQLNRQRSDSTNAINHSEVLQALSRALRKTEESYLDIADKMVMENPELALMGSCVLVMLMKGDDVYFMNVGDSRAVLAQKVEPDYWLGKIRQDLRKINEETMNDLESSFCQRTNSLITRIWFLYQEVQRIRSEHPDDPCAVMNDRVKGSLKVTRAFGAGFLKQPKCNDALLKRFRIDYIGTSPYITCSPDLRHHKLESKDKFLILSSDGLYQYFTNKEAVAEVELFVALQPEGDPAQHLVEELLFRAAKRAGLDFHQLLEIPQGDRRRYHDDVSIIVISLDGRIWRSTV* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01196 706 Gene3D - 217 703 IPR036457 -
Pte15g01196 706 PANTHER PROTEIN PHOSPHATASE 2C 249 695 IPR015655 GO:0004722|GO:0006470
Pte15g01196 706 SUPERFAMILY PP2C-like 266 699 IPR036457 -
Pte15g01196 706 SMART PP2C_4 253 695 IPR001932 -
Pte15g01196 706 Pfam Protein phosphatase 2C 416 498 IPR001932 -
Pte15g01196 706 Pfam Protein phosphatase 2C 542 646 IPR001932 -
Pte15g01196 706 ProSiteProfiles PPM-type phosphatase domain profile. 253 697 IPR001932 -
Pte15g01196 706 CDD PP2Cc 412 697 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01196 Pte-Chr15 9132890 9135761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01196 1 707 PP2C-type Phosphatase Gene Family AT1G07630 63.425 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01196 - - qsa:O6P43_000210 1040.02