Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01175 ATGCCGATCTCAAAAGTTATCATGGGAAATACGGCCGAGCTTAGCCAAGCTGATGCTCTTAAAGCAGCCCTAGCTGAATTTTTCTCAATGCTTATCTTTGTATTTGCTGGACAAGGCTCTGGCATGGCCTTCAACAAGCTCACGAACAATGGTGCAGCAACACCAGCAGGGCTTGTCTCTGCCTCACTGTCGCACGGCCTTGCATTGTTTGTAGCAGTTTCGATTGGCGCTAACATCTCCGGTGGGCATGTCAACCCTGCTGTCACATTTGGTTTATTTATTAACGGCCACATCACCCTCCTTCGGAGCATTTTGTACTGGATTGCTCAGTTACTTGGATCTGTAGTTGCTTGCGTGCTCCTTAAATTTGCTACTGGTGGCATGGAAACATCTGCATTTGCACTATCCTCGGGTGTGGGTGCATGGAATGCGGTCGTGTTCGAGATTGTAATGACTTTCGGTTTGGTATACACTGTGTACGCAACTGCTGTGGACCCAAAGAAGGGTGACATTGGAACCATTGCTCCCATTGCAATTGGTTTAATTGTGGGTGCCAACATTTTGGCTGGGGGTGCTTTTGATGGTGCATCCATGAACCCTGCAGTCTCTTTTGGGCCTGCTGTTGTGAGTTGGTCTTGGGCTAACCACTGGGTTTACTGGCTTGGCCCATGTTTTGGTGCTGGTTTTGCTGCAATCGTGTATGCTTCTTCCTCATGA 717 0.484 MPISKVIMGNTAELSQADALKAALAEFFSMLIFVFAGQGSGMAFNKLTNNGAATPAGLVSASLSHGLALFVAVSIGANISGGHVNPAVTFGLFINGHITLLRSILYWIAQLLGSVVACVLLKFATGGMETSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGTIAPIAIGLIVGANILAGGAFDGASMNPAVSFGPAVVSWSWANHWVYWLGPCFGAGFAAIVYASSS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01175 238 CDD MIP 21 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pte15g01175 238 PANTHER AQUAPORIN-8 8 235 IPR034294 -
Pte15g01175 238 SUPERFAMILY Aquaporin-like 16 235 IPR023271 -
Pte15g01175 238 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 FunFam Probable aquaporin TIP1-1 4 237 - -
Pte15g01175 238 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01175 238 Gene3D Glycerol uptake facilitator protein. 4 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01175 Pte-Chr15 8939049 8940057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01175 1 236 Major Intrinsic Protein MIP AT4G01470 78.814 1.40e-132 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01175 K09873 - csav:115718681 413.305