Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01161 ATGGAACCTATCATTTCACTGTACGCAGTTCTTGCTTTCTACCTCTCTTTTATGATCTGGAAGCTTTTGAATCAAAGAGGAAGCCGACAATGCTATATATTAGATTACCAATGTTACAAGCCTGCTGACGATAGAATGCTTGACACAGAGTTCTGTGGGGAAGTCATCAAACGCACCAAAAATCTTGGACTCAATGAGTACAAGTTCCTTCTCAAAGCCATTGTGAGTTCCGGCATCGGTGAGAAGACCTATGCCCCAAGAACTTTTTTGTCTGGCAGTGAAGACAACCCCACATTGATGGATGGAGTCTCAGAGATGGAGGAGTTTTTCCACGATAGTATTGAGAAGCTCTTGGTCAGATCAGGCATTTCTGCCTCAGCAATTGATATACTTGTCGTCAATGTCTCAATGTTATCAGGTGCTCCTTCGTTGGCATCTCGAATCATTAATTGCTACAAAATGAGGAACGACATTAAGGTTTTCAACCTCACAGGGATGGGCTGCAGTGCTAGCCTTATTTCAGTAGACATAGTGAGGAACATTTTCAAGTCCTATAACAATAAATATGCTCTTGTTGTAACCTCGGAGTCTCTGAGTCCCAATTGGTATGCGGGTAACGACAGATCTATGATTCTAGCTAACTGTTTGTTTCGTTCTGGTGGTTGTGCAATTCTTTTGACAAACAACAACTCCTTGAAACACAAAGCCATGCTTAAATTAAAGTGTCTTGTTAGGACACATCACGGGGCTATGGATGAGGCATATGACTGTTGCATGCAAAAGGAAGACGGGGAAGGTAGGCTAGGGTTTCACCTTGGCAAGAATTTACCAAAGGCTGCTACTCGAGCTTTCATTGATAATTTAAGAGTACTAGCACCAAAGATTTTGCCAATGAGGGAACTGTTCAGGTTCATGTGTGTCACATTAGTTAAAAAGCTTAGAAAAAACAACTCCCATAAGTCAACTGGGATCACCAAATCTGCAGTGAACTTCAAGACAGCTGTGGATCATTTTTGTTTGCATACTGGAGGAAAGGCAGTCATTGATGGCGTTGGGATTAGCTTGGATCTTAACGACTATGATCTTGAGCCTGCACGGATGACACTGCACCGGTTTGGAAACACATCTGCTAGTAGTCTTTGGTATGTGTTAGCGTATATGGAGGCAAAGAAGAGGTTGAAGAAAGGAGACACGGTGTTCATGATAAGCTTTGGTGCTGGGTTCAAGTGCAACAGTAGTCTTTGGGAGGTTGTCAGGGACTTAGAAGGTAATGATGATAATAACGTATGGAGAGACTGCATTGATGAGTATCCACCACAGTCCTTGGCAAATCCTTTCATGGCGAAGTATGGTTGGATTAACGACGAAGATCCAAGCACTTTCAAAATACCAGAATAA 1398 0.4242 MEPIISLYAVLAFYLSFMIWKLLNQRGSRQCYILDYQCYKPADDRMLDTEFCGEVIKRTKNLGLNEYKFLLKAIVSSGIGEKTYAPRTFLSGSEDNPTLMDGVSEMEEFFHDSIEKLLVRSGISASAIDILVVNVSMLSGAPSLASRIINCYKMRNDIKVFNLTGMGCSASLISVDIVRNIFKSYNNKYALVVTSESLSPNWYAGNDRSMILANCLFRSGGCAILLTNNNSLKHKAMLKLKCLVRTHHGAMDEAYDCCMQKEDGEGRLGFHLGKNLPKAATRAFIDNLRVLAPKILPMRELFRFMCVTLVKKLRKNNSHKSTGITKSAVNFKTAVDHFCLHTGGKAVIDGVGISLDLNDYDLEPARMTLHRFGNTSASSLWYVLAYMEAKKRLKKGDTVFMISFGAGFKCNSSLWEVVRDLEGNDDNNVWRDCIDEYPPQSLANPFMAKYGWINDEDPSTFKIPE* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01161 465 PANTHER 3-KETOACYL-COA SYNTHASE 14 439 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pte15g01161 465 Pfam FAE1/Type III polyketide synthase-like protein 27 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pte15g01161 465 PIRSF Very_long_ch_3-ktacl-CoA_syn 2 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pte15g01161 465 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 334 416 IPR013747 -
Pte15g01161 465 SUPERFAMILY Thiolase-like 26 418 IPR016039 GO:0016746
Pte15g01161 465 CDD CHS_like 30 415 - -
Pte15g01161 465 Gene3D - 63 417 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01161 Pte-Chr15 8825669 8827066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01161 19 465 Acyl Lipid Metabolism Gene Families AT2G28630 71.429 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01161 K15397 - qsa:O6P43_000257 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01161 15 8825669 8827066 Pte15g01161 15 8825669 8827066 RCT
Pte17g01496 17 29331583 29335638 Pte15g01161 15 8825669 8827066 RCT