Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01140 ATGGATCCTTCAAACGGACTACATCAGGAAATGTCTAGCCATTCGCTAGAAACCATGCTGGTTTGTTCAAAAGCTCATCAGGAGAGAAGGCCAAAGCCTCAACCGGAACAAGCTTTAAAATGCCCTAGATGCGATTCCACCAACACTAAATTCTGCTACTATAACAATTACAGCCTCTCTCAGCCAAGATACTTCTGCAAGTCTTGCAGGAGGTACTGGACCAAAGGAGGAACACTGAGGAACGTGCCAGTTGGTGGAGGCTGCAGGAAGAACAAGAGATCATCATTATCATCCAAGAGGACCCAAGATCAACCACACACGCCAAATCCCAACCTACACAATGGCATCCCTGCATTGTCTTACGATTCCAGTGACCTCACACTTGCTATAGCTAGGCTCCAAAACCAGTCAAGTGGCCAGCTGAGTTATGGTGAACACGACCTGTCTATTCTAGGAAACCCCTCCACAGCTCACTGTGACATTCTTGGCGATCATGGTTTCATGGACGTACATAGGAGTGGATTCCTAGAGACTCAGAATAATCTCCAGAGCATTTACTATGGATATGGAAATGGAGAAATGGAGAATGGTAATCAAGAGATGATGGTTCCTCCGATGAGTAATGCAACCAGTCAAGCAGTCACAGTGAGCACAGTGAAGCAAGAGTTGTGCAGTGCAAGAGAGCAGCAAAATGACAACAGGGTCTTATGGGGTTTCCCGTGGCAATTTAGTGGTGAAGGAAATATTGCTGATTTTGATCAAGGAAGAGGCAGCTGGAATAGTTTCAATTCTTCTTGGCATGGTGTTCTCAACAGTCCTCTAATGTAA 828 0.4553 MDPSNGLHQEMSSHSLETMLVCSKAHQERRPKPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSLSSKRTQDQPHTPNPNLHNGIPALSYDSSDLTLAIARLQNQSSGQLSYGEHDLSILGNPSTAHCDILGDHGFMDVHRSGFLETQNNLQSIYYGYGNGEMENGNQEMMVPPMSNATSQAVTVSTVKQELCSAREQQNDNRVLWGFPWQFSGEGNIADFDQGRGSWNSFNSSWHGVLNSPLM* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01140 275 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 24 225 IPR045174 GO:0003700|GO:0006355
Pte15g01140 275 MobiDBLite consensus disorder prediction 84 118 - -
Pte15g01140 275 MobiDBLite consensus disorder prediction 98 118 - -
Pte15g01140 275 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Pte15g01140 275 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Pte15g01140 275 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01140 Pte-Chr15 8605517 8607671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01140 1 276 C2C2-Dof Transcription Factor Family AT2G28510 43.087 8.64e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte15g01140 zf-Dof 5.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01140 - - gmx:100799737 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01140 15 8605517 8607671 Pte15g01140 15 8605517 8607671 RCT