Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01138 ATGTTACCTCTCCTCTCCTCTCCTCTCCTCTCCTCTACAATTCGCATTGAAAACTGTGCGTACTTGACATTTCACGGAGAGGAGGGCCCAAGTGGAAGCGTCATTTTCGTCTCCAACGAGCATATATCCATGGCTGATGGCTCCTTCGCTACACAGCCGAACTCCACCAAAACCGAGCACTCGGAGGATAATTGCCTCCTCTTTTCACCACCCGCCACCACTACTGCAGCAGTGACATCTGCTAACCCAAGCGGAAGGGCGCACGAGTGTTCTATCTGTCACAAGATTTTTCCAACAGGTCAGGCTCTCGGGGGTCACAAGAGTTGCCACTATGGTGCTGTAACATCACCAGAGGGCGTGGCATCAGCAAATTCCCATATCCACCGTGGTTTTGACTTCAACCTTCCAACTCCTTTACTGGAATTGTCGCCAGTAATTGGCAGTGACTCTGTAAAATTTGCAAGAAAATTTTCAGAGGAACAAGAGGTGGAGAGTCCATTACCAGTTGCTAAGAAGCCTCATTTATTATTTGCTTAA 537 0.4842 MLPLLSSPLLSSTIRIENCAYLTFHGEEGPSGSVIFVSNEHISMADGSFATQPNSTKTEHSEDNCLLFSPPATTTAAVTSANPSGRAHECSICHKIFPTGQALGGHKSCHYGAVTSPEGVASANSHIHRGFDFNLPTPLLELSPVIGSDSVKFARKFSEEQEVESPLPVAKKPHLLFA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01138 178 Pfam C2H2-type zinc finger 87 111 - -
Pte15g01138 178 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Pte15g01138 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Pte15g01138 178 SUPERFAMILY beta-beta-alpha zinc fingers 86 112 IPR036236 -
Pte15g01138 178 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 69 136 IPR044653 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01138 Pte-Chr15 8595623 8597384 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01138 85 177 C2H2 Transcription Factor Family AT1G27730 46.154 9.75e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01138 - - qsa:O6P43_011810 110.153