Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01135 ATGGAGTGCAGTGAGATAAAGACCACCTTTTCATCAAGCCCTCTTTCTCAGTCTCCTTCTCCATCAAATCCAGTAACTCCTACAGCTCCAAATGTTATTATGAGCCCTTGTGCTGCTTGTAAGATTTTGAGGCGGAGATGTGCTGACAAATGCGTATTAGCACCCTATTTCCCCCCCACGGAACCGGCCAAGTTTACCATTGCTCACAGAGTCTTTGGGGCCAGCAACATCATCAAGTTTTTACAGGAACTTCCCCAATCTCAAAGAGCTGATGCAGTGAGCAGCATGGTTTATGAGGCTGGTGCCAGGATAAGAGACCCAGTGTATGGGTGTGCAGGCTCAATTTGTCAGCTCCAAAATCAAGTTAATGAGCTCCAAGTACAATTAGCAAAGGCTCAAGCAGAGCTTGTGAACATGCAGTTTCAGCATGCCAATCTTGTTGCTTTCATTTGCATGGAGATGGGACAAACTTCTCAGCAAGAAGCTCCACAGCACGGACAGCAGCCATTTGACAGTTGTAATATATCAAGTCCAGCCCCAAGCTACCAGAGCAATCTGCAATTCTTTGATGACAATAGCAACAACCTAAATGCATTGTGTGAGGCATTATGGACATGA 618 0.4563 MECSEIKTTFSSSPLSQSPSPSNPVTPTAPNVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPQSQRADAVSSMVYEAGARIRDPVYGCAGSICQLQNQVNELQVQLAKAQAELVNMQFQHANLVAFICMEMGQTSQQEAPQHGQQPFDSCNISSPAPSYQSNLQFFDDNSNNLNALCEALWT* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01135 205 ProSiteProfiles LOB domain profile. 35 136 IPR004883 -
Pte15g01135 205 Pfam Lateral organ boundaries (LOB) domain 36 133 IPR004883 -
Pte15g01135 205 MobiDBLite consensus disorder prediction 1 27 - -
Pte15g01135 205 MobiDBLite consensus disorder prediction 1 19 - -
Pte15g01135 205 Coils Coil 115 142 - -
Pte15g01135 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01135 Pte-Chr15 8576223 8577830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01135 32 206 AS2 family AT2G28500 64.481 4.95e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte15g01135 LOB 5.7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01135 - - gmx:100819336 274.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01135 15 8576223 8577830 Pte15g01135 15 8576223 8577830 RCT