Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01130 ATGGAAATTGATCTGAACCATGCAGTGAGCGAGGTTGAGAATGCAGTTAGTAATGGAGACAGTAAGCAGAGCGGTTGTGTTTGTAGTTTTTCTTCCTCAACTTCTTCTTGTTCCCACTCATCTTCAGCTCAAGTTTCTTCTTACTTGGAGCTCTGGCATGCTTGTGCTGGTCCTCTAACATCACTGCCCAAGAAAGGCAATAGCGTGGTATACTTCCCACAAGGTCACTTGGAACAAGTTGCTTCTTTCTCTCCGTTCTCCCCCATGAGCATGCCCACTTTTGATCTCCAACCACAGATACTTTGCAGGGTTGTGGATATCCAGCTACTTGCTAACAAAGAGAATGATGAGGTTTATACGCAAATCAGTTTGCTTCCGCAACTAGAGTTGCTAAGTACGAATTTCGAGGGGAAAGAGCTGGAAGAGTTGGGACAAGAGGAGGAGTATGCTGGAGGATCACCAACCAAATCAAGTTCAACTCCACACATGTTCTGCAAAACTCTCACAGCTTCTGATACCAGCACTCACGGAGGATTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGTTTTCCACCTCTGGATTACAAGCAGCTGAGACCCTCTCAAGAGTTACTTGCCAAGGACCTGCATGGAACTGAGTGGAGATTTCGTCATATTTATAGGGGTCAACCAAGGCGTCATCTTTTGACTACAGGCTGGAGTAATTTTGTCAGCCAGAAGAATCTTGTGTCTGGTGATGCAGTGCTTTTTCTGAGAGGCGAAAATGGAGAATTGAGGTTGGGTATCAGAAGAGCTGTTCGACCAAGAAATTGTCTGCCAGAGTCAGTAATCCACAAACAAATTTCCCATGCTCAAGTCCTTTCTTCAGTTGCCACTGCAGTAGCCAGTAAAAGCATGTTTCATATATTTTACAGTCCAAGAGCAAGTCATGCAGAGTTTGTTGTGCCCTACGAGAAATATGTCAAAAGCATCAATAATCAAGTGACCATGGGAATGAGATTTAAAATGAGAATGGAAAATGATGACACTCCTGAAAGGAGGTGCAGTGGTTTAGTGACAGGCCTAGGTGATTTAGATCCCTACAGATGGCCCAAGTCAAAGTGGAGATGCTTGTTGGTCAGATGGGATGAGGATATCACCAGTAACCATCAGGAACGACTTTCTCCTTGGGAGATTGATTTATCTTTTTCCGTGGCTCCACTTAGCATCCACTCATCTCCACGATCGAAGAAACTGCGCACAGGAGTTCAGTCAACCTCACCCAAAAACCTCATCACTGGTGGTGGGTTTATGGACTTCGAGGAGTCTGTAAGATCCTCCAAGGTCTTGCAAGGTCAAGAAAACGTCGGTTTAGAACTACCCGTTTATGGCATTGATAAAGTGAACCAAAAATTGAAGATGGGGGTCTCTTCATCAGCCCTTGAAGATTTTCTATCACCTGGAATACGAAAGGCTGCCATGGATGACTTTACGAGGGTTCATCCCTCCGCATATGCAGGCTATGTGGAATCAAACAGAATTCCAAGGGTCTTGCAAGGTCAAGAAATATGCCCTATGAGATCCTTGATGGCCCCTACTGACTTAAGCAGAGGTGCCTGGAGAAAACCAAATATCAGTAGCACAACCTTCAACATGCACCAAGCACCGGAATCTGTATATGTGTACTCTATCACTGATCTAGAAGGAAAGAATGGCCCTTCTAATCCGACTTCCACTTTGAGAACTGAAGTAGTTTGCCAGTCAGATCATCGTAACGAATCAGAACTACTGGACAGAAGTTCTGCTAGTCCTTCTCCAAACCTGAGAATTCCAAATAATGAAAATTTTAACTTGAAGATGAAAGGATGCAAACTTTTTGGGATTTCTTTGAATGCGGATGCTGCAAAGCAAGCTTTACAAAACTCTACCAAGACGAGTTGTGCAAAAGTTAACAAATTGCTGATATGA 1947 0.4412 MEIDLNHAVSEVENAVSNGDSKQSGCVCSFSSSTSSCSHSSSAQVSSYLELWHACAGPLTSLPKKGNSVVYFPQGHLEQVASFSPFSPMSMPTFDLQPQILCRVVDIQLLANKENDEVYTQISLLPQLELLSTNFEGKELEELGQEEEYAGGSPTKSSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQLRPSQELLAKDLHGTEWRFRHIYRGQPRRHLLTTGWSNFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNCLPESVIHKQISHAQVLSSVATAVASKSMFHIFYSPRASHAEFVVPYEKYVKSINNQVTMGMRFKMRMENDDTPERRCSGLVTGLGDLDPYRWPKSKWRCLLVRWDEDITSNHQERLSPWEIDLSFSVAPLSIHSSPRSKKLRTGVQSTSPKNLITGGGFMDFEESVRSSKVLQGQENVGLELPVYGIDKVNQKLKMGVSSSALEDFLSPGIRKAAMDDFTRVHPSAYAGYVESNRIPRVLQGQEICPMRSLMAPTDLSRGAWRKPNISSTTFNMHQAPESVYVYSITDLEGKNGPSNPTSTLRTEVVCQSDHRNESELLDRSSASPSPNLRIPNNENFNLKMKGCKLFGISLNADAAKQALQNSTKTSCAKVNKLLI* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01130 648 Gene3D - 327 400 - -
Pte15g01130 648 MobiDBLite consensus disorder prediction 144 163 - -
Pte15g01130 648 FunFam Auxin response factor 162 266 - -
Pte15g01130 648 Pfam B3 DNA binding domain 164 265 IPR003340 GO:0003677
Pte15g01130 648 FunFam Auxin response factor 327 399 - -
Pte15g01130 648 SUPERFAMILY DNA-binding pseudobarrel domain 155 281 IPR015300 -
Pte15g01130 648 Gene3D - 162 266 IPR015300 -
Pte15g01130 648 Pfam Auxin response factor 291 371 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pte15g01130 648 CDD B3_DNA 162 264 IPR003340 GO:0003677
Pte15g01130 648 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 47 636 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pte15g01130 648 ProSiteProfiles B3 DNA-binding domain profile. 164 266 IPR003340 GO:0003677
Pte15g01130 648 SMART B3_2 164 266 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01130 Pte-Chr15 8506838 8511720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01130 46 645 B3 DNA Binding Superfamily AT5G60450 58.442 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pte15g01130 B3 5.4e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01130 - - qsa:O6P43_028348 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01130 15 8506838 8511720 Pte15g01130 15 8506838 8511720 RCT