Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01119 ATGGCGAAAGACGTAGAGGTTGCAGTAGAACAACAACCAGAATTCTCAGCTAAGGACTACCATGATCCACCTCCAGCTCCACTGTTTGACTTGGATGAACTGAAACAGTGGTCGTTCTACCGAGCTTTGATTGCTGAGTTCATCGCCACCCTTCTCTTCCTCTACATCACAGTTTTGACTGTCATAGGTCACAAGCAGAAAACGGACACCCAAAGTGGCGGTGACGTGTGTGGTGGAGTTGGCCTCTTGGGTATCGCATGGGCTTTTGGTGGAATGATCTTCATCCTTGTTTACTGCACCGCTGGTATCTCAGGAGGACACATAAACCCTGCAGTGACATTCGGGCTGTTCCTGGGAAGAAAGGTGTCGCTGATTAGGGCGTTGCTTTACATGATTGCCCAGGTCGCTGGTGCTATCTGCGGTTGTGGATTTGCAAAGGCTTTCCAAAAGGCATACTACAACAGGTACAGTGGTGGAGTCAACGAGCTTGCTGATGGGTACAGCAAAGGCACTGGATTAGGTGCTGAAATTATTGGCACATTTGTGCTTGTTTACACTGTCTTCTCAGCCACTGATCCCAAGAGAAATGCCAGAGACTCTCATGTTCCTGTCTTGGCACCCCTTCCAATTGGGTTTGCTGTGTTCATGGTTCACTTGGCTACCATCCCAATTACAGGCACGGGTATCAACCCAGCAAGAAGTTTTGGAGCCGCTGTTATTTTCAACAGCGAAAAAGCCTGGGATGACCAGTGGATTTTCTGGGTTGGACCTTTCATCGGGGCTGCCATTGCTGCATTCTACCACCAGTACATTCTTAGAGCTGCTGCTATCAAAGCTCTAGGATCCTTCAGGAGCAACGCTTGA 864 0.4896 MAKDVEVAVEQQPEFSAKDYHDPPPAPLFDLDELKQWSFYRALIAEFIATLLFLYITVLTVIGHKQKTDTQSGGDVCGGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMIAQVAGAICGCGFAKAFQKAYYNRYSGGVNELADGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSEKAWDDQWIFWVGPFIGAAIAAFYHQYILRAAAIKALGSFRSNA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01119 287 CDD MIP 41 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 FunFam Probable aquaporin PIP1-2 26 287 - -
Pte15g01119 287 Pfam Major intrinsic protein 33 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 SUPERFAMILY Aquaporin-like 33 273 IPR023271 -
Pte15g01119 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
Pte15g01119 287 NCBIfam MIP family channel protein 45 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 Gene3D Glycerol uptake facilitator protein. 26 287 IPR023271 -
Pte15g01119 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 11 276 IPR034294 -
Pte15g01119 287 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte15g01119 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01119 Pte-Chr15 8381336 8383204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01119 1 285 Major Intrinsic Protein MIP AT5G60660 80.351 6.41e-173 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01119 K09872 - rcu:8264070 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01623 18 27656203 27657568 Pte15g01119 15 8381336 8383204 RCT
Pte15g01119 15 8381336 8383204 Pte18g01623 18 27656203 27657568 RCT
Pte15g01119 15 8381336 8383204 Pte15g01119 15 8381336 8383204 RCT
Pte15g01119 15 8381336 8383204 Pte9g00561 9 8220530 8223669 RCT
Pte15g01119 15 8381336 8383204 Pte17g00897 17 24077478 24078732 RCT
Pte15g01119 15 8381336 8383204 Pte15g00450 15 3181806 3182920 RCT