Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01111 ATGGCGATGGCTCTGGCTCTGACTCAGCACAGAGAGAGTAGTGGTGGAAGTATCAACAACCATCTCGACAACGGCAAGTATGTCCGATACACGGCTGAGCAGGTTGAAGCTCTTGAAAGAGTTTATGCCGAGTGTCCCAAACCGAGCTCGTTGCGGAGGCAACAATTGATTCGAGAATGTCCCATTCTCTCCAACATTGAGCCCAAGCAGATAAAAGTTTGGTTTCAGAACCGCAGGTGTAGAGAGAAGCAGCGGAAAGAGGCTTCCCGGCTTCAGACTGTGAACAGAAAACTGAGTGCCATGAACAAATTGTTGATGGAGGAGAACGATCGCTTACAGAAACAAGTCTCGCAACTAGTCTGTGAGAATGGTTATATGCGGCAGCAGTTGCAAACGACACCAGCTGGTACTACCGGTGCAAGTTCTGATTCCGTGGTCACCACTCCTCAGCATTCATTGAGAGATGCTACCAACCCTGCTGGACTACTCTCGATAGCTGAGGAGACCTTGGCGGAGTTCCTTTCAAAGGCTACTGGAACTGCTGTCAATTGGCTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCAGTTGGGATTTTTGCTATTTCACAAAGATGCAGTGGAGTGGCAGCTCGAGCCTGCGGTCTAGTAAGTTTAGAACCTACAAAGATAGCAGAGATCCTAAAAGATCGTCCATCTTGGTTCCGGGACTGTCGGAGCCTTGAAATTTTCACAATGTTCCCTGCTGGGAATGGAGGGACAATTGAACTTATTTATACACAAACGTATTCTCCAACTACTTTGGCTACTGCTCGGGATTTCTGGACACTAAGATATACTACAACATTAGACAATGGCAGCCTGGTGGTTTGTGAGAGATCACTGTCTGGTTCTGGTGCCGGGTCAAGTGGAACTTCTGCTGCGCAGTTTGTTAGAGCTGAAATGCTTCCTAGTGGTTATTTAATTCGTCCATGTGAGGGTGGAGGATCAATTATCCACATTGTTGACCACTTGAATCTTGAGGCCTGGAGTGTGCCAGAGGTACTGCGACCACTTTATGAATCTTCTAAAGTGGTAGCTCAGAGGATGACTATTGCAGCATTGCGCTATATAAGACAAATAGCACAAGAAACAAGTGGTGAGGTTGTATACGGTTTGGGTAGACAGCCAGCTGTTCTGCGAACATTTAGCCAAAGATTGAACAGAGGCTTTAATGATGCAGTGAATGGATTCACTGATGATGGTTGGTCTGTGCTAAGTTGTGACGGTGCTGAAGATGTGATTATTGCTGTTAATTCCATAAAAAATTTGAGCACTATAACTAACCAAGCAAATTCCCTTGCCTCTCTTGGAGGTATTCTATGCGCTAAGGCTTCAATGCTGCTGCAAAATGTTCCACCTGCTGTTTTAGTACGTTTCCTTAGGGAGCACCGATCAGAGTGGGCTGATTTTAATGTAGATGCGTATTCTGCTGCATCATTGAAAGCTAGTCCTTACGCTTATCCAGGAATGAGGCCAACAAGATTCACTGGAAGTCAAATTATCATGCCTCTTGGCCATACTATAGAACATGAGGAGATGCTTGAAGTTATTCGGTTGGAAGGCCACACTCTTGCTCAAGATGATGCCTTTGTATCAAAGGATATCCACCTCTTGCAGATATGTAGTGGCGTGGATGAGACTGCAGTGGGTGCCTGCTCTGAACTTATTTTTGCTCCTATTAATGAGATGTTTCCTGATGATGCTCCATTGGTTCCTTCAGGTTTCCGCATTATACCGTTGGATTCAAGATCAGGTGATTCAAAAGATTCCTCATCTAACCTAACACTGGACCTGGCATCTGGCCTCGAAGTGACAGCAAACAATGTGGCGGCTGATGCATCATTAAGTCATAATAGTCGATCAGTGCTGACAATTGCTTTCCAATTCCCTTTTGACAGTAGTCTACGAGATAATGTTGCGATCATGGCACGTCAGTATGTTCGTAGTGTGATTTCCTCCGTTCAAGGGGTTGCCATGGCCATATCACACTCTGGTATTAGCCCAGCTGCTGGTACTAGGCTATCTCCAGCGTCCCCAGAGGCCATTACGTTAGCCAACTGGATTAGCCAGAGCTACAGTTTCTACATAGGGAGAGAATTGCTGAGATGTGATTCTGTAGGAAGTGATTCAGTTTTGAAACGATTATGGCACCATCAGGATGCGATCTTGTGTTGTTCAGTGAAGTCTCTACCAGTATTCATGTTCGCTAACCAAGCGGGGTTTGACATGCTTGAAACAAGTATAGTCGCTCTTCAAGACATCACTTTAGACAAGATATTTGATGAGTCCGGACGGAAGGCATTGTGTGCGGAATTTACCAAATTGATGCAGCAGGGTTTTGCTTATTTGCCTGCTGGGATATGCATGTCTACTATGGGACGCCATGTCTCGTACGAACAAGCCATTGCCTGGAAAGTCTTGGCTGCCGACGAGAGCATTGTTCATTGCTTGGCTTTTTCTTTCATAAATTGGTCGTTTGTATGA 2526 0.4572 MAMALALTQHRESSGGSINNHLDNGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMRQQLQTTPAGTTGASSDSVVTTPQHSLRDATNPAGLLSIAEETLAEFLSKATGTAVNWLQMPGMKPGPDSVGIFAISQRCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEIFTMFPAGNGGTIELIYTQTYSPTTLATARDFWTLRYTTTLDNGSLVVCERSLSGSGAGSSGTSAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLNRGFNDAVNGFTDDGWSVLSCDGAEDVIIAVNSIKNLSTITNQANSLASLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKASPYAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVIRLEGHTLAQDDAFVSKDIHLLQICSGVDETAVGACSELIFAPINEMFPDDAPLVPSGFRIIPLDSRSGDSKDSSSNLTLDLASGLEVTANNVAADASLSHNSRSVLTIAFQFPFDSSLRDNVAIMARQYVRSVISSVQGVAMAISHSGISPAAGTRLSPASPEAITLANWISQSYSFYIGRELLRCDSVGSDSVLKRLWHHQDAILCCSVKSLPVFMFANQAGFDMLETSIVALQDITLDKIFDESGRKALCAEFTKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLAADESIVHCLAFSFINWSFV* 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01111 841 Coils Coil 91 122 - -
Pte15g01111 841 Pfam Homeodomain 26 84 IPR001356 GO:0003677
Pte15g01111 841 MobiDBLite consensus disorder prediction 1 20 - -
Pte15g01111 841 ProSiteProfiles 'Homeobox' domain profile. 21 85 IPR001356 GO:0003677
Pte15g01111 841 Gene3D - 200 381 IPR023393 -
Pte15g01111 841 SMART START_1 164 374 IPR002913 GO:0008289
Pte15g01111 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 22 841 IPR044830 GO:0003700
Pte15g01111 841 Pfam START domain 165 372 IPR002913 GO:0008289
Pte15g01111 841 CDD homeodomain 26 86 IPR001356 GO:0003677
Pte15g01111 841 Gene3D - 19 92 - -
Pte15g01111 841 SUPERFAMILY Homeodomain-like 24 88 IPR009057 -
Pte15g01111 841 CDD bZIP 78 117 - -
Pte15g01111 841 FunFam Homeobox-leucine zipper protein REVOLUTA 26 81 - -
Pte15g01111 841 SMART HOX_1 23 89 IPR001356 GO:0003677
Pte15g01111 841 SUPERFAMILY Bet v1-like 164 376 - -
Pte15g01111 841 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Pte15g01111 841 Pfam MEKHLA domain 697 840 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01111 Pte-Chr15 8322357 8328160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01111 3 842 Homeobox Transcription Factor Family AT5G60690 80.094 0.0 1415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte15g01111 START 1.3e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01111 K09338 - cave:132164023 1451.8