Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01106 ATGATAGGAGAGCTTCCCATTGTAGTGACTCAAATGCCAAACCTCCACCATTGCAGAGACCTGTACAACGCTATGGAGGAGCTTGAGAAGGAGCCAAAATTCTTGAAGAATGGTGATGCTGGTATGGTCAAGATGATTCCCACCAAGCCCATGGTGCTTGAGACCTTCTTAGAGTATCCTCCTCTGGGACGATTTGTTGTGAGGGACATGCGTCAAACTGTTGTGGTTGGTGTCATCAAGAGTGTGGAGAAGAAAGATCCCTCTGATGCTAAGGTGATGAAGATTGCTGCAAAGAAGGGTGCCAAGTGA 309 0.4725 MIGELPIVVTQMPNLHHCRDLYNAMEELEKEPKFLKNGDAGMVKMIPTKPMVLETFLEYPPLGRFVVRDMRQTVVVGVIKSVEKKDPSDAKVMKIAAKKGAK* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01106 102 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 23 82 IPR009001 -
Pte15g01106 102 Gene3D Translation factors 7 83 - -
Pte15g01106 102 PANTHER ELONGATION FACTOR 1 ALPHA 26 99 - -
Pte15g01106 102 Pfam Elongation factor Tu C-terminal domain 15 82 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01106 Pte-Chr15 8281232 8282053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01106 26 92 Eukaryotic Initiation Factors Gene Family AT1G07930 85.075 1.44e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01106 K03231 - thj:104815750 137.502