Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01100 ATGAGTGGTTTAAGGCCGGAGCCGCATGTAGCACAACAAAGCCGGCGTGACAAGTTGAGAGTGCTGCAACATGGTTCAACATCTTCCCACCATTTTCAAGATTTCTCTCCTGATTCGCAACAATTATCAGCTCTACAACAAGGTTTAGACTCTGATCTTCTTCAAGTTAGGAATGTAAGGAATGTCAGTGTGCTGTACGAATCGGGTTATTGTTCCTCAGGAATGATGAATTTTTCAGCGTCCTCGAGTGCTGATCGCTCATCCACTCAAAAGGAAACAACGGAGTCGCAAGAAATCTTGGCTGGTCAACCTGGTATTTTAGTATTTTCTGATCGTGTTGCTCCTTTTTCCAACTCCTCCGATCTTAATGAAGGCAACTATGAGTCTCTTAATTTTGGAGGTTGGAAGAACATTGATCATCGCTCGCAGCATAACTTCGATAGTGTTGTGAATTATGCTAGTGAAATGGTAGGTAATATCAATGAAAACAATCCCGATTCTATGTTTTTTGGGCAAGGAATTAACCTTTCTGCATCTTACCAACACCATGCTAAGAATATTGACAATCGACTCCAAGATGTGCATGCTTCTTTAAGCAATCCTGCTGGTGGAATGTCCAGTCAGCAAAGTAACAGGCAGCTGGGGGAACTGAATCATATTCCTTGCGCTACTCCACTTTCCCAAAGTACTCTTCAAGATATTGTCAAGTCAGCTTCTGCAAGCAGTGGACGAGGGAAAGAGATGCATTCACTTGTGCAGCGTAATACCAAAGAAGCTGACACTAGCACTTGTATGGGCAGTGGAAATGAGCTTTTGCTTCTTTCATCATATGGGAACCAATCGAACATGTCTCGTTACAATGCTACTGCAACATGGATCGATAGATCAATTGAGAATTGTCCTCAGTGGGAAGTTTCCCAAGCTCGAAGCATTGTAGCTCAAATGAATGAACAAGGATCACAGTATACTGCCAGTGGTTTCAATCCTCAAGGCCTTTCTCTATCCCTGTCTTCTGATCCACAAGGTAACAAACATTCCACATTACAATCTAGGGGAGAATCCGGATCCGTAGACCTACGGTCTGGAATGGATAGTTCCCAAGATCCTCAACGTTTGAAATCTTCCCTCGGTGGAAAAGGTTGTCGCAAATCAGTTCAAGACATGGCGGGAACGTCAGCTAATATTGGTCAACGAAGGATGTGTCCTCTAGGCCCTTTTACTGGATACTCAACCATCCTAAAAAATTCCAGATTCTTGAAGCCTACACAACTGCTGTTGGATGAGTTTTGCATCTTGAATGATCCAAAGCTGGAGATAACTTATGATGTCATGGAGAATAGTTCCTCAAAAGGAGCTGCGTCGACTTCAACAAATGCTAGCAATGGCATTGATAATGGTGCTTCTCTTAGAGAAAATACCTCAGGTGACTCCTCCTCAATGATATACTGTTCAAATGATAGTAGGAGTGATATTGGAGTCCCAAGCAGCTCTTACGGGTCATTTCGACCAGAGTTTCAACAGAAAAAGGAGAAGCTTCTATACATGCAAGAGGAGGTGAGCCGACGATACAAGCAATATCATCAACAGATGCAAATAGTATTTTCATCCTTTGAGTCAGTAGCAGGTCTTAGTTCTACTACTCCTTACATACAGTTAGCTCTAAAGACAGTCTCAAAACACTTCAAATGTCTGAGGAATGCTATCTCAGAGCAGCTTAAGCATGTTGGACAAATGATGGGAGAGGGATTGATGGCTTCAGTGACTGGTACAACTTGTAACAAAAGTGATAACGAAATAGCACACATGGATCAAAGCTTCCACAAGCAGAAACCTGATTCTCTTAACGCAGGTTTCCTGGAACCCCTACATTCTGTGTGGAAGCCTCAGAGAGGTCTGCCCGAACGTTCTGTGTCAATCCTGAGAGCTTGGCTCTTTGAACATTTTCTGCACCCGTACCCAACTGACACAGATAAACACATGTTAGCCAGGCAAACAGGTCTATCACGAAACCAGGTATCCAATTGGTTTATAAATGCCAGAGTTCGCGTATGGAAACCTATGGTTGAGGAAATACACATGCTTGAGACCAAAGGCTTGGCAGATGGGAACCAAGACGACAGCATGAATATTGGAACAACTTATACCACTGACTCCATTTATGAGGCTACAGCATATCCTGGTTCAAACAGATTTGATACCAATTCCATATCCGAAAAGCAGTTGCAATGCTCAAGCATGGTGTCACCATCCTTGGCTGGTGTTGACAGCAGCGATGGCCTGAAAACTGAAGCATGGAATCTTGATAAGCGCTCAAAACTCAATTCTCATATTGCATCGTCTGATAAAGAGGTTTCGATGATTGGTTTTGTGCCTTACCAAGGCAGTGGGCTAGGGGTCGGAGGACTTGGATCTGTGTCACTGACTTTGGGTCTCAGACATGGTGTTGAAACTGTGCAGCAGTACCCGCAACAACAGATACAAGAGGATCAGCTTAGGCGGCAATTCGGAGGTCGTGCATGA 2520 0.4369 MSGLRPEPHVAQQSRRDKLRVLQHGSTSSHHFQDFSPDSQQLSALQQGLDSDLLQVRNVRNVSVLYESGYCSSGMMNFSASSSADRSSTQKETTESQEILAGQPGILVFSDRVAPFSNSSDLNEGNYESLNFGGWKNIDHRSQHNFDSVVNYASEMVGNINENNPDSMFFGQGINLSASYQHHAKNIDNRLQDVHASLSNPAGGMSSQQSNRQLGELNHIPCATPLSQSTLQDIVKSASASSGRGKEMHSLVQRNTKEADTSTCMGSGNELLLLSSYGNQSNMSRYNATATWIDRSIENCPQWEVSQARSIVAQMNEQGSQYTASGFNPQGLSLSLSSDPQGNKHSTLQSRGESGSVDLRSGMDSSQDPQRLKSSLGGKGCRKSVQDMAGTSANIGQRRMCPLGPFTGYSTILKNSRFLKPTQLLLDEFCILNDPKLEITYDVMENSSSKGAASTSTNASNGIDNGASLRENTSGDSSSMIYCSNDSRSDIGVPSSSYGSFRPEFQQKKEKLLYMQEEVSRRYKQYHQQMQIVFSSFESVAGLSSTTPYIQLALKTVSKHFKCLRNAISEQLKHVGQMMGEGLMASVTGTTCNKSDNEIAHMDQSFHKQKPDSLNAGFLEPLHSVWKPQRGLPERSVSILRAWLFEHFLHPYPTDTDKHMLARQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGLADGNQDDSMNIGTTYTTDSIYEATAYPGSNRFDTNSISEKQLQCSSMVSPSLAGVDSSDGLKTEAWNLDKRSKLNSHIASSDKEVSMIGFVPYQGSGLGVGGLGSVSLTLGLRHGVETVQQYPQQQIQEDQLRRQFGGRA* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01100 839 SUPERFAMILY Homeodomain-like 630 692 IPR009057 -
Pte15g01100 839 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 281 703 - -
Pte15g01100 839 MobiDBLite consensus disorder prediction 322 384 - -
Pte15g01100 839 Gene3D - 629 691 - -
Pte15g01100 839 ProSiteProfiles 'Homeobox' domain profile. 623 686 IPR001356 GO:0003677
Pte15g01100 839 Pfam Homeobox KN domain 643 682 IPR008422 GO:0003677|GO:0006355
Pte15g01100 839 MobiDBLite consensus disorder prediction 234 263 - -
Pte15g01100 839 FunFam BEL1-like homeodomain protein 4 629 691 - -
Pte15g01100 839 SMART prehox3 407 570 IPR006563 -
Pte15g01100 839 CDD homeodomain 626 687 IPR001356 GO:0003677
Pte15g01100 839 MobiDBLite consensus disorder prediction 322 373 - -
Pte15g01100 839 SMART HOX_1 626 690 IPR001356 GO:0003677
Pte15g01100 839 MobiDBLite consensus disorder prediction 448 478 - -
Pte15g01100 839 Pfam Associated with HOX 412 569 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01100 Pte-Chr15 8219597 8223185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01100 375 695 Homeobox Transcription Factor Family AT4G34610 41.358 4.39e-65 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte15g01100 POX 1.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01100 - - qsa:O6P43_000351 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01100 15 8219597 8223185 Pte15g01100 15 8219597 8223185 RCT