Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01096 ATGAATGACACTACACCTTCATCTGAACGACCAGAACTCACGAAGATATCTCAAAAAACTGTGAAGACCTCCAAGAAGACAAGGTCGTTGCTTCCAAGTAAAGCCAACAGAGACCGTCACTCCAAGGTGAATGGTAGAGACCGCCGTGTCCGATTGCCACCACTATGTGCTGCACGTATTTTCCAACTCACCCGTGAGCTCGGCTATAAAACCAATGGCCAGACGATTGAGTGGCTGTTGCAGCAAGCAGAGCCGTCTATTGCGGTCACTACTGGCAACTGCATCTCTGCCTCTTACAGCATCAGTGCCTCGAACACGCCACTTGGTCATTCTGATGACACCCAAGAGGATAGTAGTTTTGCTTATGATAGCAAAGATTTAGTCAATAAGAACTGTGTGGATTCAAGGGCAGACTTTGAGCCATTGTCAATGCTACCTTTTGAGTTTGATTTGATGTCAGCATTTGATATGGTGTTTTCTGCTAGTGAGATCGAAACGCTGCAGTCCTTGACACGAAAGTAA 522 0.4617 MNDTTPSSERPELTKISQKTVKTSKKTRSLLPSKANRDRHSKVNGRDRRVRLPPLCAARIFQLTRELGYKTNGQTIEWLLQQAEPSIAVTTGNCISASYSISASNTPLGHSDDTQEDSSFAYDSKDLVNKNCVDSRADFEPLSMLPFEFDLMSAFDMVFSASEIETLQSLTRK* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01096 173 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
Pte15g01096 173 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 118 IPR005333 GO:0003700
Pte15g01096 173 Pfam TCP family transcription factor 35 111 IPR017887 -
Pte15g01096 173 MobiDBLite consensus disorder prediction 1 30 - -
Pte15g01096 173 MobiDBLite consensus disorder prediction 31 48 - -
Pte15g01096 173 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01096 Pte-Chr15 8194815 8196998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01096 34 108 TCP Transcription Factor Family AT5G41030 64.000 5.38e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte15g01096 TCP 6.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01096 - K16221 jre:108987029 140.198