Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01078 ATGATAATCCTTACATTCTTTTATTTGAATAGGAGAAAATGTGCAAGTAATTTACGATCCACTCCCTCTAAACTCGGAAAAGTTCCCTCGAGTCCCAAGTTTCCGTCTTCAAGTATCAACGGATCTTTTATAACCAATCATTCCTCACTCTTACCAACTCTCTGGCAACAGTCACTACCCTACAATTCGACTTTCATCTTCACATTCTCTTGGCGCTGTTGTCCCCGGAGATCTCTCCATCTACCAGACATGGGTCAGATCCAGTACTCAGAGAAGTACTTTGATGACACTTACGAGTATAGGCACGTGGTACTGCCTCCCGATGTTGCTAAGCATCTGCCAAAGAATCGTCTTCTCTCTGAAAATGAATGGCGAGCAATTGGGGTTCAGCAGAGTCGAGGATGGGTTCACTATGCAATTCACCGCCCTGAGCCACACATCATGCTTTTCAGGAGGCCTCTCAATTATCAGCAGCAGCAGGAGAACCAAGCACAGCAAGGCTTGCTTGTTAAGTGA 516 0.4535 MIILTFFYLNRRKCASNLRSTPSKLGKVPSSPKFPSSSINGSFITNHSSLLPTLWQQSLPYNSTFIFTFSWRCCPRRSLHLPDMGQIQYSEKYFDDTYEYRHVVLPPDVAKHLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQGLLVK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01078 171 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 89 107 IPR000789 GO:0016538
Pte15g01078 171 Pfam Cyclin-dependent kinase regulatory subunit 87 153 IPR000789 GO:0016538
Pte15g01078 171 SMART CKS_2 86 155 IPR000789 GO:0016538
Pte15g01078 171 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 86 166 - -
Pte15g01078 171 SUPERFAMILY Cell cycle regulatory proteins 78 164 IPR036858 GO:0016538
Pte15g01078 171 PRINTS Cyclin-dependent kinase regulatory subunit signature 101 115 IPR000789 GO:0016538
Pte15g01078 171 PRINTS Cyclin-dependent kinase regulatory subunit signature 123 137 IPR000789 GO:0016538
Pte15g01078 171 PRINTS Cyclin-dependent kinase regulatory subunit signature 138 152 IPR000789 GO:0016538
Pte15g01078 171 PRINTS Cyclin-dependent kinase regulatory subunit signature 86 100 IPR000789 GO:0016538
Pte15g01078 171 Gene3D - 76 167 IPR036858 GO:0016538
Pte15g01078 171 FunFam Cyclin-dependent kinases regulatory subunit 84 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01078 Pte-Chr15 8078691 8080884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01078 84 165 Core Cell Cycle Gene Families AT2G27970 89.024 5.61e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01078 K02219 - gmx:547737 173.326