Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01071 ATGCAGGCCCTGAATTCATGCATGGGTCCAAAGGAGTTTAAGATTGCATGTTCCTCTGCTTCATTGTCAAATGAAAACCCAGCAAAGAGAAAATGTGCAAGTAATTTACGATCCACTCCCTCTAAACTCGGAAAAGTTCCCTCGAGTCCCAAGTTTCCGTCTTCAAGTATCAACGGATCTTTTATAACCAATCATTCCTCACTCTTACCAACTCTCTGGCAACAGTCACTACCCTACAATTCGACTTTCATCTTCACATTCTCTTGGCGCTGTTGTCCCCGGAGATCTCTCCATCTACCAGACATGGGTCAGATCCAGTACTCAGAGAAGTACTTTGATGACACTTACGAGTATAGGCACGTGGTACTGCCTCCCGATGTTGCTAAGCATCTGCCAAAGAATCGTCTTCTCTCTGAAAATGAATGGCGAGCAATTGGGGTTCAGCAGAGTCGAGGATGGGTTCACTATGCAATTCACCGCCCTGAGCCACACATCATGCTTTTCAGGAGGCCTCTCAATTATCAGCAGCAGCAGGAGAACCAAGCACAGCAAGGCTTGCTTGTTAAGTGA 570 0.4632 MQALNSCMGPKEFKIACSSASLSNENPAKRKCASNLRSTPSKLGKVPSSPKFPSSSINGSFITNHSSLLPTLWQQSLPYNSTFIFTFSWRCCPRRSLHLPDMGQIQYSEKYFDDTYEYRHVVLPPDVAKHLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQGLLVK* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01071 189 PRINTS Cyclin-dependent kinase regulatory subunit signature 104 118 IPR000789 GO:0016538
Pte15g01071 189 PRINTS Cyclin-dependent kinase regulatory subunit signature 156 170 IPR000789 GO:0016538
Pte15g01071 189 PRINTS Cyclin-dependent kinase regulatory subunit signature 119 133 IPR000789 GO:0016538
Pte15g01071 189 PRINTS Cyclin-dependent kinase regulatory subunit signature 141 155 IPR000789 GO:0016538
Pte15g01071 189 MobiDBLite consensus disorder prediction 25 51 - -
Pte15g01071 189 FunFam Cyclin-dependent kinases regulatory subunit 102 185 - -
Pte15g01071 189 Pfam Cyclin-dependent kinase regulatory subunit 105 171 IPR000789 GO:0016538
Pte15g01071 189 SMART CKS_2 104 173 IPR000789 GO:0016538
Pte15g01071 189 SUPERFAMILY Cell cycle regulatory proteins 96 182 IPR036858 GO:0016538
Pte15g01071 189 Gene3D - 94 184 IPR036858 GO:0016538
Pte15g01071 189 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 107 125 IPR000789 GO:0016538
Pte15g01071 189 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 104 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01071 Pte-Chr15 7989671 7993269 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01071 102 183 Core Cell Cycle Gene Families AT2G27970 89.024 2.66e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01071 K02219 - gmx:547737 173.326