Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01070 ATGGCTATTGCTGGTCTACACAATTTGTCAGTGCTTCAGTCTCCTTTGCTTGGAGGCTCTCATTCTCGCCGCAGTAATGGAGGGATGGGAAGCACCGGTGCATCCTCACTCTTACGAATGTGGCGAGAGTTTGAGGAAGAGCACATGGTGAATCCAGCACGAGAAAGATCTCTAGATCAGTTGAACCGGACTGATGGTTTGATCAATGATCTGTCTGAAACTGAGTGTGAAACATGGCCTGAGAATCAGAATGGATCACGTGATGAGCATGAAGTGTCCAGCAATTTCAGCTGTGACAACTCTTTTGATTTTGGGGAACTGGAAAGGGAAAGTGTGAGGCAAGTTTTTAGGGAATGGATGAATAGTGGTGAAAGGGAACATCCATCAAACATTTCCACAGTGAATAACAGCTCAAGGGAAGAGTGGCTTGCTCACAATGAGCACGAGCAAACAAGAATCATAAGGGAGTGGGTAGAGATGAATTGTCAGCAAAGAGGTGCCTGTGGTGTTAATAGAGAAGAGCAATCTGCTGAAGTTGTCTCCCAAATTGAACGCATTAGTGATGAACTGGCTTTGGACCAAAGTGATGGCCTCATTCATCACACTGAGAGGGTCCGAAGGGGTATCCGTAAGTTATGTGGGAGGCAGGCTCTCCTTGATATGCTTAAGAAAGCTGGGAAGGAAAGGCAAAGAGAACTTCAGGAGTTGATGGAGCAACAGGCTGTGTCTCATTTTCCTCATCGTAACAGAATTCAGGCACTACTCAGAGGTAGATTCTTGCATAATGGTCGATTGACTGAGAATATCAGACCCACTTCGACCACAGAAAGTGAGTTGGGTTTCTTGAGGCGAAGACAAACAGTGTCTAGCTTAAGGGCAGGATTTTTGTCCCGTTTAGTTGATCCTGGTTCTGTTCAAGTGACCAACAACCAATGTGATGCATCATCTAATGCTGCCATGGATACTGCTACAACTAAACACACAGTGGGTGGCAACTTTTTGATCCTTAATGAGCACCTACCACCACCAGAGTTAAACTATGTACAGAATTGTAGTCTTCAGTTGTTGGGTGTTGAGGATTGCTTATATGCAACTTGGAGTATTAATGCAGATCAGGCAGAATCAGCTCTTTATGTGGACCAGGTGCATCAACCAGCACTGGGGTATGAGTTAAGAGATGGGCATTCATTACCGGCAAGAATAAATTGCGAACAGGGTGTTGATGAGATTTCAGAGGTTTCTACCTTCGATAAACCAAAACCGAATACTCCAAAGATCGAATGTGACTCCCAAGATGAGCAGTCAACCTTGACTGTTGAACTTGTTGAAAGAAGAGATAGGTTGGATGGGGCTTCACAGGATGCATCTTCTAGTAATTTAAGAGATGAGCAGTCACCTGCCACTGAGTTGCTCGAAAGGACAGATGAAAATGAAGAAAATGCCAAAGGAACTTCGACTGGAGGTCTCAGTGAGAATGTAGGACAGGATAATATGGAAAATTCTAGTGACAAGTCCAATGAACCTTTTGATCTGGGGGGTGAAAGTGCTGATGCTGGTGGATCTCCGAATCATTCCCGTGTTGCTGAATCTACATTGCAAGAAGGACGTCAGCAGGGAGAAGTCCTTGAAGATGCAGGAAATATCTGGAAACGAAGTACCATTGAATATATTGACTGGACAGAGAGCGGTCAAGGACATTTGAGTGAAAATAGGCAAAATAACAATGCTAGTGACCGGTCTCAACACATGTTGGGAAATGGAGATGAAGATATTTCTCCTATGCAAGAAGCTCCTGATACATGGAATGGAGATCATGGTTTCCAAGAGGCTGTGCATAATTGTTTGGGAAGGTCTGACTGTGAAATTTCTATTACTAGTAGAGTTGATGCATTTTACTTTCCTGATGATGACAATGTGTCCAGTGTGGAACTCAGGGACCTGCTAAGTAGGAGGAGTGTCTCCAACCTTCTTCAAAGTGGCTTTCGTGAGAGTCTTGACCAGTTGATTCAATCGCATGTGGAAAGGCAAAGTCATGCTGATGTTGACTCGGAGTTTCATGATGACACCCCTTCTTCAGCATGGGCAGAACAAGATTTGGATCTACAGAGGAGGGATCCTGGAGCACATCCTGAGAATGCAGCTGATAGTCCTATCAACAGACCTGCACCGCCAACTCCACCTTCTCAGCGTCTCTGGGACCAGCAGTCCTGGTCTCACCATGATATTTGGCCACGTGATACCGTCAGTAATCAGCGCTTGGAGATAGAATGGGACATCATAAATAATTTGAGGATTGACATGGCTAGGCTACAGTGGAAGATGAATGACATGCAGAGAATGCTGGAGACTTGTGGGAATATGCAGCTTGAGTTGCAGCGCTCCATAAGAGAAGAAGTATCTGCAGCTCTAAATCGCTCCGACGGTTCACCAGATGCAAGTGAAGAATGTCCAGTTGATAAATCTAAGTGGGAACATGTGAGGAAAGGAGTATGCTGTATATGTCGTGAAAGCAATATCGATTCTCTGTTGTACAGATGCGGACACTTGTGTACATGTTTAAAGTGTGCGAATGAATTGATGCGAAGTAGACAAAAATGCCCAATGTGTCAAGCACCAGTTATAGAAGTTTTACGTTCTTATTCTATACAGTAA 2652 0.4442 MAIAGLHNLSVLQSPLLGGSHSRRSNGGMGSTGASSLLRMWREFEEEHMVNPARERSLDQLNRTDGLINDLSETECETWPENQNGSRDEHEVSSNFSCDNSFDFGELERESVRQVFREWMNSGEREHPSNISTVNNSSREEWLAHNEHEQTRIIREWVEMNCQQRGACGVNREEQSAEVVSQIERISDELALDQSDGLIHHTERVRRGIRKLCGRQALLDMLKKAGKERQRELQELMEQQAVSHFPHRNRIQALLRGRFLHNGRLTENIRPTSTTESELGFLRRRQTVSSLRAGFLSRLVDPGSVQVTNNQCDASSNAAMDTATTKHTVGGNFLILNEHLPPPELNYVQNCSLQLLGVEDCLYATWSINADQAESALYVDQVHQPALGYELRDGHSLPARINCEQGVDEISEVSTFDKPKPNTPKIECDSQDEQSTLTVELVERRDRLDGASQDASSSNLRDEQSPATELLERTDENEENAKGTSTGGLSENVGQDNMENSSDKSNEPFDLGGESADAGGSPNHSRVAESTLQEGRQQGEVLEDAGNIWKRSTIEYIDWTESGQGHLSENRQNNNASDRSQHMLGNGDEDISPMQEAPDTWNGDHGFQEAVHNCLGRSDCEISITSRVDAFYFPDDDNVSSVELRDLLSRRSVSNLLQSGFRESLDQLIQSHVERQSHADVDSEFHDDTPSSAWAEQDLDLQRRDPGAHPENAADSPINRPAPPTPPSQRLWDQQSWSHHDIWPRDTVSNQRLEIEWDIINNLRIDMARLQWKMNDMQRMLETCGNMQLELQRSIREEVSAALNRSDGSPDASEECPVDKSKWEHVRKGVCCICRESNIDSLLYRCGHLCTCLKCANELMRSRQKCPMCQAPVIEVLRSYSIQ* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01070 883 MobiDBLite consensus disorder prediction 481 508 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 565 582 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 72 95 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 565 587 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 703 735 - -
Pte15g01070 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 807 881 IPR013083 -
Pte15g01070 883 Coils Coil 760 780 - -
Pte15g01070 883 Coils Coil 219 239 - -
Pte15g01070 883 ProSiteProfiles Zinc finger RING-type profile. 831 870 IPR001841 -
Pte15g01070 883 SUPERFAMILY RING/U-box 821 876 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 414 544 - -
Pte15g01070 883 Pfam Zinc finger, C3HC4 type (RING finger) 829 875 - -
Pte15g01070 883 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 445 883 - -
Pte15g01070 883 CDD mRING-HC-C3HC5_NEU1 831 880 - -
Pte15g01070 883 MobiDBLite consensus disorder prediction 466 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01070 Pte-Chr15 7983551 7989518 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01070 831 877 C3H Transcription Factor Family AT3G06140 42.553 3.85e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01070 - - qsa:O6P43_000397 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01070 15 7983551 7989518 Pte15g01070 15 7983551 7989518 RCT