Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01068 ATGAAAGAACACTCGAGACGAAAGGTCCAATTGGAAGGACACAAATTTCACAGAAAACTCTTGGCAAACATAAATCCCAAAGACGCAAACAACTCCACATTCACCACATCGCCACTTCCTCTCCACTCAGAAAATGAATTTCCCCCTTCCACGCCACCAATTTATCCTCCACCGGCGATGCCATTCTCCGTGGTAACAACCCCACCTCATTTTGAGAACCCCATAACTCCATTATCGGGCTCAGAGCACCAGTCTAACGGTATCTACTTATTTCTCGTCCCCTTGTTCTTCTTATTCTGCTTCATGATCACTTATCTCTGGCGCTTCATATGTTGTTGTCCTTTTATACCCGCCACCGTCTTTTACCGTCGCCAGCGGGACTCATTCCCGTCGACTTCTGGTTCCAATTTCGAGTCAGCCTTCGGCAAAGGTCTTGATCCAAATATCATCGACTCTCTTCCGGTGGTCTCATATAATTTCAAGGACATGAACCAACAGAGTGATTGCGTGATTTGTCTTGGTGAATTTGAAGAAACTGAAGCCGTGAAGGCATTGCCATTTTGCACTCACGTGTTTCATCCCCAATGCATTGATGTGTGGCTTATGTCTCACGTGACATGTCCAATCTGCCGGTCCTCCATACTTTGTGGAGTGACATTCAGAGATGCTGGTGAAGTTGACGGGATTGAGCTGACTCAGTAA 702 0.463 MKEHSRRKVQLEGHKFHRKLLANINPKDANNSTFTTSPLPLHSENEFPPSTPPIYPPPAMPFSVVTTPPHFENPITPLSGSEHQSNGIYLFLVPLFFLFCFMITYLWRFICCCPFIPATVFYRRQRDSFPSTSGSNFESAFGKGLDPNIIDSLPVVSYNFKDMNQQSDCVICLGEFEETEAVKALPFCTHVFHPQCIDVWLMSHVTCPICRSSILCGVTFRDAGEVDGIELTQ* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01068 233 MobiDBLite consensus disorder prediction 26 44 - -
Pte15g01068 233 FunFam E3 ubiquitin-protein ligase ATL6 134 216 - -
Pte15g01068 233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 215 IPR013083 -
Pte15g01068 233 SMART ring_2 169 210 IPR001841 -
Pte15g01068 233 MobiDBLite consensus disorder prediction 26 47 - -
Pte15g01068 233 SUPERFAMILY RING/U-box 149 219 - -
Pte15g01068 233 PANTHER RING FINGER DOMAIN-CONTAINING 72 214 - -
Pte15g01068 233 ProSiteProfiles Zinc finger RING-type profile. 169 211 IPR001841 -
Pte15g01068 233 Pfam Ring finger domain 168 211 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01068 Pte-Chr15 7980645 7982103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01068 88 215 C3H Transcription Factor Family AT2G27940 41.791 9.94e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01068 - - cave:132164401 111.309