Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01066 ATGTCGGTACCTCCATGGCTGGAAAGCTTGCTATCAACCACATTCTTCTCCGCATGCCAAATACACACTAGTACCGCTAGAAACGAATGCAACATGTACTGCCTCGATTGCGAAGAGGGGGCATTCTGCTTTTACTGCAGATCAACACTACACAAAGAGCATCAGGTTATTCAAATTAGGCGGTCATCCTATCACAATGTTGTCAGAGTGGCAGAGATTCAAAAGGTTTTGGATATCAGTGGAGTCCAGACATATGTCATCAACAGTGCCAGAGTTCTTTTTCTGAATGAGAGACCTCAACCTAAGACCAATGTCACTAGTGTAAAAGCTGGTTCACATTTTTGTGAAATCTGTGCAAGAAGTCTCTCAGACCCATTTCACTTTTGTTCTTTGGGGTGCAAGCTTGTAGGAATAAAGGAGAATGGGAATGGGAGCTTTATGATGACAAATGGCAATCCAGAGGGAAGAGTAGGAAGAAGAGAAGGAATGGCATCAATAGACGCAGAATCAGTGGTAGAAGAAGGTGAAGGATTGCGTGAAAGCATGCAAAGACAAGTTCATCGAAGCACGCCGCACACACCACCACTGCGCCCTCGTTCAAATTCAAGAAGGAAGGGAATACCACGCAGGTCGCCTTTAATGCCCTAA 648 0.4491 MSVPPWLESLLSTTFFSACQIHTSTARNECNMYCLDCEEGAFCFYCRSTLHKEHQVIQIRRSSYHNVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKTNVTSVKAGSHFCEICARSLSDPFHFCSLGCKLVGIKENGNGSFMMTNGNPEGRVGRREGMASIDAESVVEEGEGLRESMQRQVHRSTPHTPPLRPRSNSRRKGIPRRSPLMP* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01066 215 CDD Bbox2 19 59 - -
Pte15g01066 215 MobiDBLite consensus disorder prediction 170 215 - -
Pte15g01066 215 MobiDBLite consensus disorder prediction 170 186 - -
Pte15g01066 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 213 - -
Pte15g01066 215 Pfam PLATZ transcription factor 60 135 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01066 Pte-Chr15 7976180 7977518 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pte15g01066 PLATZ 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01066 - - cave:132161883 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01066 15 7976180 7977518 Pte15g01066 15 7976180 7977518 RCT