Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01060 ATGGCGGAAAATCGGAACGGTGATCGTGACGAGGTCAGTGATTACACATCCGAAGATGAAGGGACTGAGGATTACAGACGAGGAGGTTACCATGCTGTTCGAATTGGAGACAGCTTCAAGAATGGAAGTTATGTCGTCCAGAGAAAGCTTGGGTGGGGGCATTTTTCTACGGTGTGGCTTGCTTGGGACACCCAGCGATCGCGATATGTAGCCCTAAAAATTCAAAAGAGTGCTCAGCATTACACAGAAGCTGCAATGGATGAAATAAAGATTCTTAAACAGATAGCTGAGAGAGACCCGGATGACAATAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCAGGGCCAAACGGGCAACATGTGTGCATGGTATTTGAGTATCTTGGTGATAATCTTCTGACTCTTATTAAATATAGTGATTACCGAGGACTTCCTCTTCATAAGGTTAAAGAAATTTGTGTCCATATCCTTGTGGGTTTGGATTATTTGCATGGTCAACTGTCTGTCATACACACAGATTTGAAGCCAGAGAATGTATTGCTTCTTTCCATGATAGATCCATCTAAGGATCCTACCAAATCTAGCGCTCCTCTGATCCTTCCAGCCTCCAAGGAGATGTCTGGGACCTCAAATGAAAGCAAGATGTTGAATGGGGATCTGACCAAGAACCAGAAAAAGAAAATCCGGAGGAAGGCTAAGAAGTCAGCTCAGGGTAGTGGCTCAAAGGAAACTTCTGATGAAACTGAGGCTGATGCTAGAACACCTGATCTAGAAGATTCTGGTAATGATGTCAAGTCAAATAGCGATTCCATTGAAGATAACTTGGATAGTCCCTTGATGAGGGATAGATCGACAAAGCTTACTGAGAGAAGGGATGAATCAATAAAGCTTACTGAGACAAAGGGTGTGTCCCAAGGAAAACATGGTCAACGGAGACCGAGCCGATCTACAAGGAAGAAGTTACTTGCTGATGTTGACCTTAAGTGCAAGTTGGTTGATTTCGGAAATGCTTGTTGGACTTATAAGCAATTCACTAGTGATATTCAGACAAGGCAGTATAGGTGTCCAGAGGTCATTCTTGGATCGAAGTATTCTACGTCAGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGTTGGCCACTGGTGATGTGCTTTTTGACCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCACCTGGCATTGATGATGGAGCTTCTTGGGACGATGCCACGCAAGATTGCTTTAGGAGGCCGCTATTCCCGGGACTTCTTCAACAGGCATGGTGATCTGAGGCACATCCGCCGGTTACGTTTCTGGCCTCTTAGTAAAGTGCTCATGGAAAAGTATGAATTCAGTAAGCAAGATGCAACTGATATGGCTGACTTCCTTGTCCCCATATTTGATTTTGTGCCTGACAATAGGCCAACAGCAGCTGAGTGCCTTAGTCATCCCTGGATAACTGCTGGTCCTCGAACTCGTGAGCCTATGATGACTTGTTTGCAACCAGTGTCTGCAGATGGAGATATGACTGAGAAATTGAGAATGGAGAAGGATGAACAGGAGGCAATGGAAGCTGGGGTTGGTAATATAGCCATCGGTGAAGATTCAGGTCTCGTCAGAGTCCCCCAGTCTACCCTTACGTCACCAAGATAA 1668 0.4466 MAENRNGDRDEVSDYTSEDEGTEDYRRGGYHAVRIGDSFKNGSYVVQRKLGWGHFSTVWLAWDTQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAERDPDDNKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYSDYRGLPLHKVKEICVHILVGLDYLHGQLSVIHTDLKPENVLLLSMIDPSKDPTKSSAPLILPASKEMSGTSNESKMLNGDLTKNQKKKIRRKAKKSAQGSGSKETSDETEADARTPDLEDSGNDVKSNSDSIEDNLDSPLMRDRSTKLTERRDESIKLTETKGVSQGKHGQRRPSRSTRKKLLADVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADMWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGTMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPLSKVLMEKYEFSKQDATDMADFLVPIFDFVPDNRPTAAECLSHPWITAGPRTREPMMTCLQPVSADGDMTEKLRMEKDEQEAMEAGVGNIAIGEDSGLVRVPQSTLTSPR* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01060 555 MobiDBLite consensus disorder prediction 206 220 - -
Pte15g01060 555 SMART serkin_6 44 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01060 555 Pfam Protein kinase domain 324 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01060 555 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01060 555 MobiDBLite consensus disorder prediction 1 23 - -
Pte15g01060 555 ProSiteProfiles Protein kinase domain profile. 44 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g01060 555 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 14 513 - -
Pte15g01060 555 MobiDBLite consensus disorder prediction 188 320 - -
Pte15g01060 555 CDD STKc_SRPK 33 491 - -
Pte15g01060 555 MobiDBLite consensus disorder prediction 246 300 - -
Pte15g01060 555 Gene3D Transferase(Phosphotransferase) domain 1 127 492 - -
Pte15g01060 555 SUPERFAMILY Protein kinase-like (PK-like) 40 508 IPR011009 -
Pte15g01060 555 FunFam CMGC/SRPK protein kinase 30 129 - -
Pte15g01060 555 FunFam Serine/threonine-protein kinase SRPK-like protein 321 491 - -
Pte15g01060 555 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Pte15g01060 555 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Pte15g01060 555 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01060 Pte-Chr15 7819943 7824277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01060 1 537 EF-hand Containing Proteins AT5G22840 65.265 0.0 715
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pte15g01060 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01060 K08832 - vvi:100260164 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01060 15 7819943 7824277 Pte15g01060 15 7819943 7824277 RCT