Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01056 ATGGCTGGTATGCATTTGGAGTTTTGGGCTGTGGAGGTTAAAGCTGGAGAGCCCCTTAGGGTCCCAGTTGATGATGAATTCCTTGTCCATCTTTCACAGGCAGCTCTTGGTGAGTCAAAGAAAGAAAAAGGAAGTGAACCGGTAGTTCTTTACGTGACATTTGATTCGAAGAGGCTTGTTTTGGGGACACTTTCGAGAGAGAGTATCCCTCATATTTCTATGGATGTCGTGTTTGAGAAAGAATTTGAGCTCTCTCATAACTGGAAAAATGGAAGCGTATACTTCTGTGGGTACAAAGCTAATCAGGGACACTCAGAAGAATATCCTTTAAGGAATTATGTTTATTTTACCCTGTTTTATGATATCACGCCTCTAGCTTACTGCTTTAAGTCATGTAGTTCATTTCCTTGA 411 0.4112 MAGMHLEFWAVEVKAGEPLRVPVDDEFLVHLSQAALGESKKEKGSEPVVLYVTFDSKRLVLGTLSRESIPHISMDVVFEKEFELSHNWKNGSVYFCGYKANQGHSEEYPLRNYVYFTLFYDITPLAYCFKSCSSFP* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01056 136 Gene3D Nucleoplasmin core domain 2 104 - -
Pte15g01056 136 Pfam Nucleoplasmin-like domain 8 98 IPR041232 -
Pte15g01056 136 FunFam Histone deacetylase HDT1 6 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01056 Pte-Chr15 7793593 7794401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01056 6 99 C2H2 Transcription Factor Family AT3G44750 56.383 2.97e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01056 - - jcu:105637357 145.976