Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01052 ATGATAATTTCTGCTGGATCGGAATCGGAGAAGTTGATCAAGAGGTCGCCCAAGGAAAAGGAGGGGAGAGGAAATGAGATTGATGCACATGAGCGGAAATTGGGTCTTGAATCGAGGAGGCAGGCTGTGCTGGCGAAGCCTATAGTATTAATTGGACGATATGTGTTGAAGGATTTCAAGCGGAATGGGGTCTTTCTAGGTAAAGATGTGTATTATTGTACCGGCCTATATATAGTCAATTACGAGGATGGTGATTTTGAAGACCTTGACAGTGGTGAGTGTCATGTTCTGATTGCAAATGAGTCGGAGAAGCCACCTTCTGCGTATGCATCTCTGGGTGTTAGTAGGGCTAATGTATCCAAATTGAATGAGCTAAGGTTGGATTCAGCTGATGAACATGATGGTGAACAAGTTGAGTCTGATTATTCATCTAGTGATTCTTGTGAGGGGACCAAGGGAATTGTTCATGATATTAATCCCAAGGCAATGTCAATTCATCCATTGCAGTTGTTGCCATCTTCTGGAACTATTGGTGTACCTGAGCAGTATGTCTCGCATCTTCTCTCACTTTATGGATTCCTACGATCCTTTAGCATCCGTCTGTTCTTGACTCCTTTTTCTCTGGATGAATTTGTAGGATCACTTAATTGTTGTATCCCAAACACGTTGATTGATGGCATTCATGTCTCCCTGTTGCATCTTTTGAGAAGTCAACTTGAAATGCTGTCCTCAGGTTTCAGAGATTGCTTCAAATTGCCTGAGTGGTGGTCACGTTGGTGCAGTGATTGGAGCTTGCTTGATATTTTGACTTGGCCCATATATGTAGTTCAGTATTTGACTATCAATGGTTATATAAAGGGATCAGAGTGGGATGGATTCTATGATGAGGTCTTCAATAGTGCGTATTATTCACTAGCAGTTGGCAGGAAGTTGATGGGAGAGGAATTCTCTGAATATGATTCAGAACCCTTGGATCTAAAAGACAGTAATGGAAGTGCTGATGTTGATAGAAATGGGGATGAATGCTGGAAGCAATTTGTCTACTATACTGGAAGCCATATAGGTCCGACTTGA 1074 0.4209 MIISAGSESEKLIKRSPKEKEGRGNEIDAHERKLGLESRRQAVLAKPIVLIGRYVLKDFKRNGVFLGKDVYYCTGLYIVNYEDGDFEDLDSGECHVLIANESEKPPSAYASLGVSRANVSKLNELRLDSADEHDGEQVESDYSSSDSCEGTKGIVHDINPKAMSIHPLQLLPSSGTIGVPEQYVSHLLSLYGFLRSFSIRLFLTPFSLDEFVGSLNCCIPNTLIDGIHVSLLHLLRSQLEMLSSGFRDCFKLPEWWSRWCSDWSLLDILTWPIYVVQYLTINGYIKGSEWDGFYDEVFNSAYYSLAVGRKLMGEEFSEYDSEPLDLKDSNGSADVDRNGDECWKQFVYYTGSHIGPT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01052 357 SMART testlast3 181 241 IPR018501 -
Pte15g01052 357 MobiDBLite consensus disorder prediction 130 149 - -
Pte15g01052 357 MobiDBLite consensus disorder prediction 11 27 - -
Pte15g01052 357 MobiDBLite consensus disorder prediction 1 27 - -
Pte15g01052 357 Pfam DDT domain 183 237 IPR018501 -
Pte15g01052 357 ProSiteProfiles DDT domain profile. 181 241 IPR018501 -
Pte15g01052 357 PANTHER PHD FINGER FAMILY PROTEIN 47 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01052 Pte-Chr15 7765087 7767223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01052 32 311 PHD Transcription Factor Family AT5G35210 39.355 2.49e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pte15g01052 DDT 4.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01052 - - qsa:O6P43_028471 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01052 15 7765087 7767223 Pte15g01052 15 7765087 7767223 RCT