Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01048 ATGGCTTCTTCAACGAGGGTAGATCTGGACGGGGAACCAATAAAGCCAATAACCATTTGCATGATTGGTGGGGGTGGTTTCATTGGGTCTCACCTCTGTGAGAAGCTCATGGCTGACACGCCACACAAAGTTATTGCTGTTGATGTTTACAACGACAAGATCAAGCATCTCCTTGAGCCTGATTCCATTTGGAAAGACCGAATCCAGTTCCATCGCTTGAACATCAAGAATGATTCAAGGCTTGAGGGACTCGTTAAGATGTCAGACCTGACTATCAACCTTGCTGCAATCTGTACTCCAGCGGATTATAACACTCGTCCCCTCGACACAATTTATAGCAACTTCATTGATGCACTGCCAGTGGTCAAGTACTGTTCGGAAAACAACAAGCGTCTCATCCATTTCTCTACTTGTGAAGTGTACGGAAAAACTATTGGATGCTTTCTACCTAAAGATAGTGCTCTTCGTCAAGATCCTGCATACTATGTTCTGTCAGAAGATACTACCCCGTGCATTTTTGGTCCCGTTGAGAAGCAAAGATGGTCATATGCTTGTGCGAAGCAATTAATTGAAAGATTGATTTACGCTGAGGGAGCTGAGAATGGACTTCAGTTCACCATTGTGAGGCCTTTCAACTGGATTGGTCCTAGGATGGACTTCATTCCTGGAAATCGTCTCCGCCGGGAGCCACTCAAGCTTGTTGATGGAGGTGAATCACAGAGAACCTTTATTTATATAAAGGATGCAATTGAAGCTGTTGTCTTGATGATTGAAAATCCTTCGAGGGCTAATGGTCATATCTTTAACGTGGGTAACCCCAACAACGAAGTTACAGTAAGGCAGCTAGGTGAAATGATGACCAAGGTTTACACTGAGGTAAGTGGAGAACCAGCTCTCGAAGTCCCAACCATTGATGTTAGCTCCAAAGAGTTTTACGGTGAGGGATACGATGACAGCGACAAAAGAATTCCTGACATGACCATAATCAACAGGCAGCTTGGCTGGAACCCTAAGACGTCGCTTCGGGATCTTCTTGATTCTACCCTTACTTACCAGCACAAAACATATGCCGATGCTGTGAGGAAAGTCAAAGCAAAACCACTTTCCAGTTGA 1113 0.4456 MASSTRVDLDGEPIKPITICMIGGGGFIGSHLCEKLMADTPHKVIAVDVYNDKIKHLLEPDSIWKDRIQFHRLNIKNDSRLEGLVKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGCFLPKDSALRQDPAYYVLSEDTTPCIFGPVEKQRWSYACAKQLIERLIYAEGAENGLQFTIVRPFNWIGPRMDFIPGNRLRREPLKLVDGGESQRTFIYIKDAIEAVVLMIENPSRANGHIFNVGNPNNEVTVRQLGEMMTKVYTEVSGEPALEVPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLRDLLDSTLTYQHKTYADAVRKVKAKPLSS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01048 370 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 18 355 - -
Pte15g01048 370 Pfam NAD dependent epimerase/dehydratase family 19 271 IPR001509 -
Pte15g01048 370 Gene3D - 17 361 - -
Pte15g01048 370 CDD Arna_like_SDR_e 18 355 IPR045869 GO:0016831
Pte15g01048 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 354 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01048 Pte-Chr15 7735259 7738016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01048 19 358 Monolignol Biosynthesis Gene Families AT2G33590 21.264 6.43e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01048 K12449 - tcc:18590419 668.692