Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01037 ATGAAGGTGGTCGCTGCATATTTGTTGGCGGTGTTGGGTGGTAACACCAGCCCTTCTGCCGACGATTTGAAGGAAATTCTCGGATCCGTGGGAGCGGAGGCTGATGATGATAGAATTGAGCTTCTCTTGTCTCAAGTCAAGGGTAAAGATATTACTGAGTTAATTGCTGCGGGAAGGGAGAAGTTAGCTTCTGTTCCATCTGGTGGTGGTGTTGCTGTTGCGGCACCTGCAGGTGGTGCTCCTGGTGGCGCTGGCCCTGCTGCTGAACCACCTAAGGAAGAGAAGAAGGTGGAGGAGAAAGAGGAGTCTGATGATGATATGGGCTTCAGCTTGTTCGATTAG 342 0.5117 MKVVAAYLLAVLGGNTSPSADDLKEILGSVGAEADDDRIELLLSQVKGKDITELIAAGREKLASVPSGGGVAVAAPAGGAPGGAGPAAEPPKEEKKVEEKEESDDDMGFSLFD* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01037 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pte15g01037 113 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pte15g01037 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pte15g01037 113 MobiDBLite consensus disorder prediction 89 103 - -
Pte15g01037 113 Gene3D - 1 59 IPR038716 -
Pte15g01037 113 MobiDBLite consensus disorder prediction 73 113 - -
Pte15g01037 113 Pfam 60s Acidic ribosomal protein 17 112 - -
Pte15g01037 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01037 Pte-Chr15 7664595 7666879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01037 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.298 1.16e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01037 K02943 - tcc:18590362 136.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01037 15 7664595 7666879 Pte15g01037 15 7664595 7666879 RCT