Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01025 ATGGCTGAGGAACACAGATGCCCAGCCCCACGTTTATGCGCTAACAACTGTGGATTCTTTGGAAGCCCAGCTATGCAAGACCTCTGCTCCAAATGTTACAGAAATTTGCAGCTTAAGGAACAACAATCTTCATCAGCCAAGGTTGCCCTCAACAAGTCTCTAAATCCTTCGTCATCGTCGCCGTCTCTAGCGCCTGCGGTGACGGTTTCGGTTGCTTCACCTCATCCGATGTTTGATCTGCCGGTTGGTGTCGAGGAGAAGAGCGTGCCTGCTGTTATCAATCAGCCTAACAGGTGCAGGACGTGCAGTAAGCGCGTAGGTCTCACCGGATTCAAGTGTCGGTGCGGGATGACCTTTTGCGGGTCGCATCGGTACCCAGAGCAGCATGCCTGCGAATTTGATTTCAAGATTATGGGTCGGGAGCAGATTGCGAAAGCGAACCCACTGGTGAAAGCAAAGAAACTTGAGAAGATATGA 477 0.5115 MAEEHRCPAPRLCANNCGFFGSPAMQDLCSKCYRNLQLKEQQSSSAKVALNKSLNPSSSSPSLAPAVTVSVASPHPMFDLPVGVEEKSVPAVINQPNRCRTCSKRVGLTGFKCRCGMTFCGSHRYPEQHACEFDFKIMGREQIAKANPLVKAKKLEKI* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01025 158 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Pte15g01025 158 FunFam Zinc finger AN1-type containing 6 77 154 - -
Pte15g01025 158 SUPERFAMILY AN1-like Zinc finger 85 153 IPR035896 -
Pte15g01025 158 Gene3D - 81 154 IPR035896 -
Pte15g01025 158 Gene3D - 1 65 - -
Pte15g01025 158 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Pte15g01025 158 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Pte15g01025 158 SMART AN1_Zf_4 99 136 IPR000058 GO:0008270
Pte15g01025 158 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 158 - -
Pte15g01025 158 ProSiteProfiles Zinc finger AN1-type profile. 93 139 IPR000058 GO:0008270
Pte15g01025 158 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Pte15g01025 158 Pfam AN1-like Zinc finger 99 135 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01025 Pte-Chr15 7593271 7595980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01025 1 159 C2H2 Transcription Factor Family AT3G52800 50.000 8.89e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01025 - - mnt:21405182 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01025 15 7593271 7595980 Pte15g01025 15 7593271 7595980 RCT