Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01020 ATGGCGAGCAACAGAGTTGGAGAAATTGACCTTTCAGAGTCAGGACCTGCAAATCTCCATCTTCATTATGGATTTCTTCATGGAACTGATGCTTCTTCTGCGTGTTTCATGAATCAACAAGGCTCTGCTTTTGATTTCGGGGAGCTGGAAGAGGCCATTGGGTTGCAAGGAGTTAATATTAAAAATAATGCAGCCAAAGCACCTTTATTCACAGGAAGACCTGCAGCTACACTGGAAATATTCCCTTCGTGGCCAATACGATTTCAGCAAATCCCAAGAGGAAGCTCAAAGACAGGACGAGAGAGTAGTGATTCAGGATCAGCAGCAAACACTATTTCAAGCAAGATTGAGGCACAGTTGGAACCAGAATCGCCTATTAGTATAAAGGAAACCTCTTTAGATCACAAGGCTTTAAATCAGAATCATCTACAACAAGAGATGGTGAACGATAACTCAAGTACGGGCAAATCGCCTAACCAATCAGCTGCCAAATCACCACAAGAAAAGCGGAAGGGAGCTGGTTCCACGTCGGATAAACACCATCAACTTGATGCCAAGACACTGAGGCGTTTAGCTCAGAACCGAGAGGCAGCAAGGAAAAGTCGTCTCAGGAAAAAGGCTTATGTCCAACAACTAGAGTCAAGTAGAATGAAGCTGACGCAGCTTGAACAAGAGTTGCAAAGAGCGCGGTCTCAGGTTTTAAATGTTCAGTCTCTTCTCGATCGAGCTACAATATTTGACATGGAATATCAAAAGTGGTTAGAAGATGATCAACGTCACTTGGGGGAGCTCCGGACTGGGTTGCATGCATTACCGGAATGTGACTTGAGACTCGTAGTTGATGGTTATCTCTCACATTACGATGAGATTTTCAGGCTCAAGGCCATGGCTGCAAAGTCAGATGTCTTTCACCTCCTTACCGGGATGTGGACTACCCCAGCTGAACGCTGTTTCCTTTGGATGGGAGGTTTTAGGCCCTCAGAGCTCATCAAGATGCTGATACACCAACTAGAGCCTCTAGCTGAACAGCAAATTGTGGGAATCTACAGTCTCCAACAGTCGTCGCAACAGGCTGAGGATGCTCTCTCTCAAGGCCTGGAACAGCTGCAGCAGTCCATTGTCGACACTGTTGCAGGTGGCCCAGTCATTGATGGAGTACAGCAGATGGTTGTTGCCGTAAGCAAGCTTGCCAATCTCGAGGGTTTTGTCCGCCAGGCTGACAATTTGAGGCAACAAACCCTTCACCAAATACATCGGATATTGACTGTTCGACAAGCAGCACGGTGTTTTCTAGTCATCGGAGAGTACTATGGCCGACTCCGAGCCCTCAGCTCCCTGTGGGCATCACGACCAAGAGAGTAA 1362 0.4692 MASNRVGEIDLSESGPANLHLHYGFLHGTDASSACFMNQQGSAFDFGELEEAIGLQGVNIKNNAAKAPLFTGRPAATLEIFPSWPIRFQQIPRGSSKTGRESSDSGSAANTISSKIEAQLEPESPISIKETSLDHKALNQNHLQQEMVNDNSSTGKSPNQSAAKSPQEKRKGAGSTSDKHHQLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRMKLTQLEQELQRARSQVLNVQSLLDRATIFDMEYQKWLEDDQRHLGELRTGLHALPECDLRLVVDGYLSHYDEIFRLKAMAAKSDVFHLLTGMWTTPAERCFLWMGGFRPSELIKMLIHQLEPLAEQQIVGIYSLQQSSQQAEDALSQGLEQLQQSIVDTVAGGPVIDGVQQMVVAVSKLANLEGFVRQADNLRQQTLHQIHRILTVRQAARCFLVIGEYYGRLRALSSLWASRPRE* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01020 453 ProSiteProfiles DOG1 domain profile. 243 450 IPR025422 GO:0006351|GO:0043565
Pte15g01020 453 Coils Coil 205 239 - -
Pte15g01020 453 FunFam BZIP family transcription factor 185 234 - -
Pte15g01020 453 MobiDBLite consensus disorder prediction 91 126 - -
Pte15g01020 453 MobiDBLite consensus disorder prediction 148 186 - -
Pte15g01020 453 MobiDBLite consensus disorder prediction 91 120 - -
Pte15g01020 453 MobiDBLite consensus disorder prediction 148 166 - -
Pte15g01020 453 PANTHER TRANSCRIPTION FACTOR TGA9 140 453 - -
Pte15g01020 453 MobiDBLite consensus disorder prediction 171 186 - -
Pte15g01020 453 SUPERFAMILY Leucine zipper domain 186 235 IPR046347 GO:0003700|GO:0006355
Pte15g01020 453 SMART brlzneu 182 242 IPR004827 GO:0003700|GO:0006355
Pte15g01020 453 Pfam bZIP transcription factor 185 227 IPR004827 GO:0003700|GO:0006355
Pte15g01020 453 Pfam Seed dormancy control 260 334 IPR025422 GO:0006351|GO:0043565
Pte15g01020 453 Gene3D - 185 243 - -
Pte15g01020 453 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Pte15g01020 453 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01020 Pte-Chr15 7544451 7550044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01020 135 453 bZIP Transcription Factor Family AT1G08320 67.976 3.07e-155 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte15g01020 DOG1 3.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01020 K14431 - cave:132163552 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g01020 15 7544451 7550044 Pte15g01020 15 7544451 7550044 RCT