Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01017 ATGATGTACCACCATCAACAACACCAAGTAAATCACATCCACTCTTCCTCAGGACTCCATATCCCTTCTGACAGGCATATGTTCATTCAAGGTGGCAACCGTCCTGGAGATTCAGGTCTTGTTCTCTCAACTGATGCCAAGCCTAGACTCAAATGGACACCAGATCTTCATGCCAGATTTATAGAAGCAGTTAATCAATTAGGTGGAGCAGACAAGGCAACACCAAAAACAGTAATGAAACTTATGGGCATTCCAGGGCTTACCCTTTATCACCTGAAGAGCCACCTACAGAAGTTCAGATTGAGCAAGCATGTACATGTCCAAAATCAAAACCTGGCCAATAAAATTGGTAAGATAAAACTTTATTATGTACAGAAGTGTTTCTCTGTGGTCAGATGCATACTCATTGTAATATTTTCTATTCAAACTAAGTTATATCATGCAGGTGCAGAAGGAGAACGGATTTCTGAAGTTAATGAAACTCATATGAACAATTTTAGTCTTGGACCTCAAACGCCCAAAGAATTACCTATCAGTGAGACACTACAGATGCAGATTGAAGTGCAGAGAAGTTTGCATGAACAGCTTGAGGTTCAGAGACACTTACAACTCCGTATAGAAGCTCAAGGGAAATACCTGCAATCAGTGTTGGAGAAAGCACAAGAGACACTTGGAAGACAGAATTCAGGCACATTAGGACTGGAAGCTGCTAAACTACAACTCTCTGAACTCATGTCGAAAGTGTCATCGCAATGCCTGAATTCTACAACTATGGACATGAAGGAATTACGAGCATTTTGTCCACAAAAAATACAAGGTAATCAGCCCACAGATTCTTCAATTAGCTGCCGCACATGCTGTGAAGGAACACAAAAGGACCACGATTTTAGAAGTGGAGTCATTAGCTTGAGACCACCGTATAATACTAATGCCTTCATTGAACAGAAGGAGATTATGGAAGATCCTATCCAACAGAATGTTAAACATTATTATTATAGTGATGATCCAATAGGGAACAAGTTTCTTTCCACATTAGGAAAAGATGCAGTGATAAACTTTCAGGTAGAAAGAAACACTAGTAATTTGACAATGAGCATTGGACTTGAAGGAGAAACTAAGAACTTTAGCCACCAATATCCCAAGACATTTAACATGGGAAGGGACATCAATGATAATTTCGAAGACAGAAGAAACAAGAGGACAGAGCTGTTCGACATAGAAGACGAGAAAATTGCAAGGGAGTATAAGTTCCCTTACTTTCCAGGTAGACTGGACCTTAATGCCTGTGATGAAAATGATGCTACAGCAAATATCAAACAACTTGACTTAAATGGTTTCAGTTTAAGTTGA 1350 0.3948 MMYHHQQHQVNHIHSSSGLHIPSDRHMFIQGGNRPGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKFRLSKHVHVQNQNLANKIGKIKLYYVQKCFSVVRCILIVIFSIQTKLYHAGAEGERISEVNETHMNNFSLGPQTPKELPISETLQMQIEVQRSLHEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNSGTLGLEAAKLQLSELMSKVSSQCLNSTTMDMKELRAFCPQKIQGNQPTDSSISCRTCCEGTQKDHDFRSGVISLRPPYNTNAFIEQKEIMEDPIQQNVKHYYYSDDPIGNKFLSTLGKDAVINFQVERNTSNLTMSIGLEGETKNFSHQYPKTFNMGRDINDNFEDRRNKRTELFDIEDEKIAREYKFPYFPGRLDLNACDENDATANIKQLDLNGFSLS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01017 449 Pfam Myb-like DNA-binding domain 49 98 IPR001005 -
Pte15g01017 449 FunFam Myb family transcription factor 46 104 - -
Pte15g01017 449 NCBIfam myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Pte15g01017 449 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Pte15g01017 449 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 290 IPR044848 GO:0003700
Pte15g01017 449 Pfam MYB-CC type transfactor, LHEQLE motif 177 223 IPR025756 -
Pte15g01017 449 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Pte15g01017 449 Gene3D - 46 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01017 Pte-Chr15 7510973 7513386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01017 79 450 G2-like Transcription Factor Family AT3G04030 45.067 1.35e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte15g01017 Myb_DNA-binding 4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01017 - - pvy:116123155 503.442