Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g01001 ATGGCAGGTCTTGCAAAGGAAGCTCAGCTGTCTTTTGTTGCTTCGTCCATTTTTCCAGGCTTCAGGTTTTCTCCAACAGACGAGGAATTGATTTCATATTACTTGAAGAAGAAGTTGCATGGTCATGCAGAAAGCGTGCAAGTCATTTCAGAGATCGAGATTTGTAGATACGAGCCTTGGGATTTGCCAGCCAGATCAGTGATTCAGTCTGAAAAGGAGTGGTTCTTCTTCTCCTCTCGTGGAAGAAAATACCCAAATGGCTTACAGAGTAAGAGGGCAACTGAATCTGGTTACTGGAAAGCCACAGGGAAAGAACGAAATGTAAAGTCTGGCTCTAATGTGATCGGTACAAAACGGACTTTGGTCTTCCACTTGGGTCGTGCGCCAAAGGCGGAAAGAACAGAGTGGATTATGCATGAATATTGCATCCTTGATAAATCCCAGTTATTTCAGGATTCTTGGGTTGTATGTCGCCTCAGGAGGAACACTGAGTTCCGATTAAATGATGCTCCGAATCGAGCTTTTTCAGGTCAAAGGACTCTAGTAACTTCACATGATAGCAGTGCTGTTTCTAATGTAGGTCTTAATCGAACAGGAGCTTCTAATCGGGCTATTACAGAAGTTGGAAGCAGTAGTTATGGTTCTCATTCTATGGAGCAAATTGATTCTGCATCTGAATCCTCCCAGAAACAAACCAATGAGTTTGCTTTAACAGATAGTCCAAGTCTCATAAAGGAAACAGATGAAGAGGACTGTTTTGCGGATATACTGAAAGATGAGATTATCAAGCTGGATGAATCTTCAAAAGCTTCCGTCGCTGAAGCCTTGCCAGAGTGTGCTTATCCACACCTGGTGAAAAGTAAAGCTGAATCTTCCAGCTCGCTAATGCTAGGAAACCACCACTTGGACGAGCAAATACTGCAACAAGATCATGTCCAAGAATACACTGCTCGACGAAGAATAAGATTGAGGAAGCACAAATCATGGTGCCATTCAGCTGGAACAGCAAATTTATATGAAACACCCAATAAGGTGTACGTCAGGGGTAGAGGTCAGTTCCCAAGTCCAGAACAGCAACCAAATGCCAGTTTCTCTGCAAAAACGACCTTGTGTGTTGCTATTATTTGTTTGTGCCTTTTTTGTTTTTCTCCCTTGTGGGGAGTTTCAAAAGGGTTTAATATCTTGGGAGTAAATTCTCAGTTTCAGATGTAA 1212 0.4257 MAGLAKEAQLSFVASSIFPGFRFSPTDEELISYYLKKKLHGHAESVQVISEIEICRYEPWDLPARSVIQSEKEWFFFSSRGRKYPNGLQSKRATESGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKAERTEWIMHEYCILDKSQLFQDSWVVCRLRRNTEFRLNDAPNRAFSGQRTLVTSHDSSAVSNVGLNRTGASNRAITEVGSSSYGSHSMEQIDSASESSQKQTNEFALTDSPSLIKETDEEDCFADILKDEIIKLDESSKASVAEALPECAYPHLVKSKAESSSSLMLGNHHLDEQILQQDHVQEYTARRRIRLRKHKSWCHSAGTANLYETPNKVYVRGRGQFPSPEQQPNASFSAKTTLCVAIICLCLFCFSPLWGVSKGFNILGVNSQFQM* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g01001 403 FunFam NAC domain-containing protein 100-like 26 166 - -
Pte15g01001 403 Gene3D NAC domain 26 166 IPR036093 GO:0003677|GO:0006355
Pte15g01001 403 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Pte15g01001 403 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Pte15g01001 403 MobiDBLite consensus disorder prediction 210 237 - -
Pte15g01001 403 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 255 - -
Pte15g01001 403 SUPERFAMILY NAC domain 10 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g01001 Pte-Chr15 7433670 7435483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g01001 4 273 NAC Transcription Factor Family AT2G27300 49.451 6.20e-83 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g01001 NAM 3.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g01001 - - cam:101495489 372.859