Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00999 ATGCCTTCCAACAAACGGAGATCGCTAAGAACCCTAATTACAGCTAGTTTAGGTTGTGGTTGTGGTTGTGGTTGTGACAAGCCCGATCTCTCATACATACACGTTCACGAACCCAGTCCTCCTACACCTAAAATCACCATCCACTCCAAGCCAAATCCTTGCAGCCATACTCCTTCAACTTCTACAACTTCGGGTGAAAGAACAGGTAGTCTTTCTATGGTCGATCATGAAGATTTGACGTCGACCGTCATCTCTGAAGCTGAGGCTGATCATCATAAGATGATGTGGGGTAGCTGCTCGATCAAGAATACCGTTCACCAAGGCAACAAATTACTCATCGACAGTATAGCAGTTGAGAAAGAGTCGGAAGATCCGTACAAAGACTTCAGAATGTCCATGCTTCAGATGATCTTTGAGAAAGAGATTTCCGCAGAAGTTGACCTTCAAGAGCTTCTTGCTTGTTTACTGGCGCTGAATTCACCATGCCATCACGAGGTCATCCTCGAGGCCTTCAGTCAGATCCGCCAAGAGGCCTTTCCTGAAGAGAGAGTGCAGGCTGCTGATCATGATCGATCTAGCAAGAAACCAGATCGAGCATCATCCACGAGTTGA 612 0.4657 MPSNKRRSLRTLITASLGCGCGCGCDKPDLSYIHVHEPSPPTPKITIHSKPNPCSHTPSTSTTSGERTGSLSMVDHEDLTSTVISEAEADHHKMMWGSCSIKNTVHQGNKLLIDSIAVEKESEDPYKDFRMSMLQMIFEKEISAEVDLQELLACLLALNSPCHHEVILEAFSQIRQEAFPEERVQAADHDRSSKKPDRASSTS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00999 203 MobiDBLite consensus disorder prediction 181 203 - -
Pte15g00999 203 MobiDBLite consensus disorder prediction 48 70 - -
Pte15g00999 203 ProSiteProfiles OVATE domain profile. 118 177 IPR006458 -
Pte15g00999 203 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pte15g00999 203 MobiDBLite consensus disorder prediction 41 70 - -
Pte15g00999 203 NCBIfam uncharacterized plant-specific domain TIGR01568 116 174 IPR006458 -
Pte15g00999 203 Pfam Transcriptional repressor, ovate 122 176 IPR006458 -
Pte15g00999 203 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 73 175 IPR038933 GO:0045892
Pte15g00999 203 MobiDBLite consensus disorder prediction 181 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00999 Pte-Chr15 7411359 7411970 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pte15g00999 Ovate 3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00999 - - gmx:102670259 130.183