Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00993 ATGGCGGCTTACTTTCATGGAAATGGCTCCGAAATTCAATCGTCAGATGATGGTCTGCAGACACTTTACCTAATGAATCCCAACAACTACGTAACTTACGCCGATAATGCTCACCACCCTGCAGCTGCACCTCCCAACATGTTCTTCCTCAATCCCACTGTCCCCAGCAACGCGCGCGACCTTCTTGATTTATCCCACGCGCCACCTCCTTCATCCAACCAGCCCTTATTCGGTATTACCCTTCCGGCTAACATGGTCGGATCTAGTAACAAAGATGATCCAGGCCGTTCCTCATTGCTTACGCACCATGAAATCTCAGGCGTACAAGGGTTGTCTGCTCCTCGAGGCCAATACCACTTATGGGGACCAGTGATCGATCAGACAGCTTCACCCATGGCTGGAACGGGAACAGCAACACCCAGTTCTTGTGGAGCTGCCGCCGGTACGATGGACGTCGCATCTCAGATGGGGTTTCGAAGACCGAATCAGCAGGGTTTGTCACTGAGCCTCTCATCCCAGCAAACTGTGTATAGGTCTCTTTCTGGAGAAACTGACGTTCCTGGTCATAGGTATCAGTTTCCGGCTCCGTCACCGACAAATGGAGACCGCTCTAGCCACGACGATAATCGAGTTATCGGTAACTCTTCATCATCTGTGTCTAACGGGATTACAGATATGCAGAAAGTATTTCTGGGGTCTAAGTACTTGAAGGTTGCTCAAGAACTTTTGGATGAAGTTGTTAACGTGGGAAAAGTAATAAATAAAGCGGAAACAGAGGAAGCTGCTATGGGGAAAATGAAGATGGAAAATGAAGATTCAAAGGAAGGAATTGGAGATGTTCCCTATGGTACCAGTGAGAATAATCTTAACAAGCAAGGAAGTGAGCTTACCACTGCTCAAAGACAAGAGCTTCAGATGAAGAAGACTAAACTTGTTAGCATGCTAGACGAGGTGGAACAAAGGTACAGGCAGTACCGTCAGCAAATACAAATGGTAGTATCATCGTTTGAGCAGGCAGCAGGGTTAGGCGCGGCGAAATCATATACATCCCTTGCTTTGAAGACCATCTCAAAGCAATTCCGATGTCTCAAAGACGCAATTTCCTCTCAAATAAAAGCAACAAGCAAGAGTTTAGGTGAAGATCATTGCATAGGCGCCAAGATCGAGGGTTCCAGACTTAGGTTTGTTGATCATCATCTTCGGCAGCAGAGGGCAATGCAACAGCTGGGAATCATCCATCACAATGCTTGGAGACCCCAAAGAGGATTGCCAGAAAGAGCTGTTTCGGTTCTTCGTGCCTGGCTTTTTGAGCATTTCCTTCACCCCTACCCTAAGGACTCGGACAAAGTTTTGCTTGCACAACAAACTGGACTTACACGTAGCCAGGTATCCAATTGGTTCATAAATGCCCGAGTCCGGCTATGGAAGCCAATGGTTGAAGAAATGTATATGGAGGAAACGAAGGAGCAAGAGCATAAACATTCCGATGACTCAAGCAGGTTAAAAGAATCAAACAAGGAATTGCCATCCATAGCAACCATGGCACGGGAACCAGATTTCACAGGACAAAATCAAATGAAAGCAGTCCAATCAAAACCTGAAATGCTTCCCCATCAAAAAATTTCTACAGCTGAAGTATCGATATCTTCCATGTCGACTTCTCTCTCAGGTGGATGCCTGCAATCTCAGTCCGGTTTTAACCTTTTAGGCTCTGGCGACATGCAAAGAAGTCCAAACAAAATGCAAAATTCTCCTAGTAGCATATTGTCGGTGTACATGGAGATGAAGCCTGGAGAGACAAATAGAGATGTTGGTGTAGAATTTGGAATTAACCGGCAAAGCAAGGGTGGGTATTCTTTAATGAGTGAAACTCCAGACCAGGGTAGTGACCCATTCGAACCATATTCCGTGGGAGATATTGGAAGGTTCAACTCACAGGAATTGACCCCTAGATTCCATGGCAATGGTGTTTCTCTCACCCTGGGCCTTCCCCACAGCGAGAATCTCTCTCTCAGAGGAAACCAGCATGGGATAGGATACCTCCCACTCCAAAACATGCAGTTAGGTAGGCTTGAGATTGGAGCTACGGGAACAGAGTTTTGTGCAATCAATACCCCACAATCTTCCTATTCAAGCAATGGTTTTGACAACATTGACATCCAAAACAGAAAAGGATTTGCTGCTCAATTGTTGCCTGACTTTGTGGCTCGATGA 2214 0.4621 MAAYFHGNGSEIQSSDDGLQTLYLMNPNNYVTYADNAHHPAAAPPNMFFLNPTVPSNARDLLDLSHAPPPSSNQPLFGITLPANMVGSSNKDDPGRSSLLTHHEISGVQGLSAPRGQYHLWGPVIDQTASPMAGTGTATPSSCGAAAGTMDVASQMGFRRPNQQGLSLSLSSQQTVYRSLSGETDVPGHRYQFPAPSPTNGDRSSHDDNRVIGNSSSSVSNGITDMQKVFLGSKYLKVAQELLDEVVNVGKVINKAETEEAAMGKMKMENEDSKEGIGDVPYGTSENNLNKQGSELTTAQRQELQMKKTKLVSMLDEVEQRYRQYRQQIQMVVSSFEQAAGLGAAKSYTSLALKTISKQFRCLKDAISSQIKATSKSLGEDHCIGAKIEGSRLRFVDHHLRQQRAMQQLGIIHHNAWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVLLAQQTGLTRSQVSNWFINARVRLWKPMVEEMYMEETKEQEHKHSDDSSRLKESNKELPSIATMAREPDFTGQNQMKAVQSKPEMLPHQKISTAEVSISSMSTSLSGGCLQSQSGFNLLGSGDMQRSPNKMQNSPSSILSVYMEMKPGETNRDVGVEFGINRQSKGGYSLMSETPDQGSDPFEPYSVGDIGRFNSQELTPRFHGNGVSLTLGLPHSENLSLRGNQHGIGYLPLQNMQLGRLEIGATGTEFCAINTPQSSYSSNGFDNIDIQNRKGFAAQLLPDFVAR* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00993 737 Coils Coil 301 335 - -
Pte15g00993 737 ProSiteProfiles 'Homeobox' domain profile. 414 477 IPR001356 GO:0003677
Pte15g00993 737 FunFam BEL1-like homeodomain protein 9 420 482 - -
Pte15g00993 737 Gene3D - 420 499 - -
Pte15g00993 737 Pfam Associated with HOX 231 368 IPR006563 -
Pte15g00993 737 SMART prehox3 224 369 IPR006563 -
Pte15g00993 737 MobiDBLite consensus disorder prediction 263 293 - -
Pte15g00993 737 Pfam Homeobox KN domain 434 473 IPR008422 GO:0003677|GO:0006355
Pte15g00993 737 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 156 500 - -
Pte15g00993 737 CDD homeodomain 417 478 IPR001356 GO:0003677
Pte15g00993 737 SMART HOX_1 417 481 IPR001356 GO:0003677
Pte15g00993 737 MobiDBLite consensus disorder prediction 485 504 - -
Pte15g00993 737 SUPERFAMILY Homeodomain-like 418 484 IPR009057 -
Pte15g00993 737 MobiDBLite consensus disorder prediction 180 219 - -
Pte15g00993 737 MobiDBLite consensus disorder prediction 485 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00993 Pte-Chr15 7355186 7359389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00993 1 736 Homeobox Transcription Factor Family AT2G35940 43.205 1.07e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte15g00993 POX 4.6e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00993 - - qsa:O6P43_028591 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00993 15 7355186 7359389 Pte15g00993 15 7355186 7359389 RCT