Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00987 ATGTTCGGAAGGGCACCTAAGAAAAGTGATAACACCAGGTACTACGAGATATTGGGGGTTTCTAAGAACGCTAGTCCCGATGATCTCAAGAAGGCTTACAAGAAGGCTGCCATAAAAAACCATCCTGATAAGGGTGGAGATCCTGAGAAGTTCAAAGAGCTAGCACAAGCTTATGAGGTGTTGAGTGATCCCGAGAAACGTGAAATATATGATCAGTACGGAGAAGATGCGCTCAAGGAAGGAATGTCTGGTGGTGGTGGTGGGCATGACCCATTTGACATATTCTCAAGCTTTTTCGGTGGAAATCCATTCGGAGGTGGTAGCAGCAGAGGAAGGAGGCAGAGACGACGAGGAGAAGATGTGGTTCATCCTCTGAAAGTCTCGTTGGAGGATTTATATCTGGGAACATCTAAGAAGCTCTCCCTTTCTAGAAATGTAATATGCTCAAAGTGCAGTGGTAAAGGGTCAAAATCTGGAGCTTCATTGAAGTGTCCTGGTTGTCAAGGAACTGGTATGAAGGTCACAATTAGGCAATTAGGTCCTGGTATGATTCAGCAAATGCAGCATGCTTGCAATGAGTGTAAGGGTACTGGAGAGACAATCAACGACAAAGACCGCTGTCCACTGTGCAAGGGAGAGAAGGTTATACAAGAGAAGAAAGTATTGGAAGTCATTGTGGAGAAAGGTATGCAGAATGGACAGAAGATAACATTTCCTGGTGAAGCAGATGAGGCGGTATGCTTTTTAAAACAGAATGATACGTGCTATTCAATTCACGGCATATTAAAATTGGACTCTGATCTTTTTTCTTATGATCTGCAGCCTGACACAGAGACAGGGGATATCGTCTTTGTACTTCAGCAGAAGGAACATCCCAAGTTCAGGAGGAAGGGTGAGGACCTTTTTGTGGAGCACACATTATCCCTCACTGAGACTCTATGCGGATTCCAGTTTGTATTGACCCACTTGGATGGTAGACAGCTCCTGATCAAATCCAATCCTGGTGAAGTTGTTAAGCCTGATTCATACAAGGGAATCAATGACGAGGGTATGCCTATGTATCAAAGGCCCTTCATGAAGGGGAAACTCTACATTCACTTCAACGTGGAGTTCCCTGATTCTCTCAGTCCTGATCAAGTTAAAGTTTTGCAAGCTGTGTTACCAGCGAAGCCTACATCTCAGTTGACGGACATGGAGTTGGATGAGTGTGAAGAGACTACACTTCACGATGTCAACATTGAGGAGGAGATGAGGAGGAAGCAGCAGGCTCAACAGGAGGCATATGATGAAGATGATGACACGCATGGTGGTGCACAGAGAGTTCAGTGTGCTCAACAGTGA 1341 0.4504 MFGRAPKKSDNTRYYEILGVSKNASPDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMSGGGGGHDPFDIFSSFFGGNPFGGGSSRGRRQRRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASLKCPGCQGTGMKVTIRQLGPGMIQQMQHACNECKGTGETINDKDRCPLCKGEKVIQEKKVLEVIVEKGMQNGQKITFPGEADEAVCFLKQNDTCYSIHGILKLDSDLFSYDLQPDTETGDIVFVLQQKEHPKFRRKGEDLFVEHTLSLTETLCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKGINDEGMPMYQRPFMKGKLYIHFNVEFPDSLSPDQVKVLQAVLPAKPTSQLTDMELDECEETTLHDVNIEEEMRRKQQAQQEAYDEDDDTHGGAQRVQCAQQ* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00987 446 CDD DnaJ 14 63 IPR001623 -
Pte15g00987 446 MobiDBLite consensus disorder prediction 414 437 - -
Pte15g00987 446 FunFam dnaJ protein homolog 10 109 - -
Pte15g00987 446 Pfam DnaJ C terminal domain 277 372 IPR002939 -
Pte15g00987 446 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pte15g00987 446 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pte15g00987 446 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pte15g00987 446 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 427 IPR044713 GO:0006457|GO:0030544
Pte15g00987 446 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Pte15g00987 446 MobiDBLite consensus disorder prediction 414 446 - -
Pte15g00987 446 Pfam DnaJ domain 14 71 IPR001623 -
Pte15g00987 446 Pfam DnaJ central domain 148 214 IPR001305 GO:0031072|GO:0051082
Pte15g00987 446 ProSiteProfiles Zinc finger CR-type profile. 135 219 IPR001305 GO:0031072|GO:0051082
Pte15g00987 446 Pfam DnaJ C terminal domain 122 259 IPR002939 -
Pte15g00987 446 SUPERFAMILY Chaperone J-domain 8 107 IPR036869 -
Pte15g00987 446 Hamap Chaperone protein DnaJ [dnaJ]. 10 420 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte15g00987 446 FunFam DnaJ subfamily A member 2 291 373 - -
Pte15g00987 446 Gene3D - 148 214 - -
Pte15g00987 446 Gene3D DnaJ domain 10 109 IPR036869 -
Pte15g00987 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 119 245 IPR008971 GO:0006457|GO:0051082
Pte15g00987 446 Gene3D - 291 373 - -
Pte15g00987 446 CDD DnaJ_zf 148 214 IPR001305 GO:0031072|GO:0051082
Pte15g00987 446 SUPERFAMILY HSP40/DnaJ peptide-binding domain 294 382 IPR008971 GO:0006457|GO:0051082
Pte15g00987 446 Gene3D - 110 289 - -
Pte15g00987 446 CDD DnaJ_C 119 375 - -
Pte15g00987 446 SMART dnaj_3 12 66 IPR001623 -
Pte15g00987 446 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 145 217 IPR036410 -
Pte15g00987 446 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pte15g00987 446 FunFam DnaJ subfamily A member 2 148 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00987 Pte-Chr15 7289901 7292720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00987 14 73 C2H2 Transcription Factor Family AT1G74250 44.928 6.94e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00987 K09503 - gmx:547558 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00987 15 7289901 7292720 Pte15g00987 15 7289901 7292720 RCT
Pte17g00595 17 9189142 9190098 Pte15g00987 15 7289901 7292720 RCT