Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00985 ATGGGGACAACCCTTCAAACCTATCCTCAAGATCCTCAGAAACAACACAAATTCCCGGAAGATTCTAGCAATAAGGAGTTTGGATCATCTTCAAAATGCAACAAATTTACTGCATTCGATACTGAAGAGCATGAAGAAACCAGAATGCCTCCAATTTGCCCTCCCGAGAAGAGACAAAGAGTCCCTTCTGCATATAACCGTTTTATAAAAGAGGAAATTCAAAGAATTAAGGCCAGTAATCCAGATATCAGCCACAGAGAGGCCTTTAGCACAGCTGCTAAAAACTGGGCACATTTCCCTCACATTCATTATGGACTAAAGCTAGATGGAAACAAGCAAGCAAAGTTGGACCAGACTATCTCAGGAGAAGGGACTCAAAAATCTAATGGCTTCTACTGA 399 0.4135 MGTTLQTYPQDPQKQHKFPEDSSNKEFGSSSKCNKFTAFDTEEHEETRMPPICPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHYGLKLDGNKQAKLDQTISGEGTQKSNGFY* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00985 132 FunFam Axial regulator YABBY 51 121 - -
Pte15g00985 132 Gene3D High mobility group box domain 53 105 IPR036910 -
Pte15g00985 132 MobiDBLite consensus disorder prediction 37 53 - -
Pte15g00985 132 Pfam YABBY protein 14 106 IPR006780 GO:0007275
Pte15g00985 132 CDD HMG-box_SF 60 96 - -
Pte15g00985 132 MobiDBLite consensus disorder prediction 1 59 - -
Pte15g00985 132 PANTHER PROTEIN YABBY 6-RELATED 9 116 IPR006780 GO:0007275
Pte15g00985 132 SUPERFAMILY HMG-box 52 100 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00985 Pte-Chr15 7263660 7267773 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00985 12 133 C2C2-YABBY Transcription Factor Family AT1G08465 65.041 3.06e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte15g00985 YABBY 2.1e-40 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00985 K25796 - tcc:18590164 215.312