Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00974 ATGGATAACGCACTCAATAACCCCAACATCCTTAAAAACAACAACCCCAGAAGGACTTCTCCTCCTAGTACTATCCAGTTTCCAGTTAATCTTAATTGTTCGCATGATTATCACAATTCACCAGTACCCTCTGGTGACAAGCATAGGATCATGGATGCGATGGACTTTTTTCCTGAACATAACAAGAAGGGTGATGATGATAAGCTTGCCTCTACCTCTGCATACGCTGAAACTTTTGACAATAGTGCTCCTCTTGTATTAGAGTTAAAAACCGGTCTTCATCTTCTTACTACAAACACTGGGAGTGACGAATCTGTAGTCGATGATGGTCTATCACCAAACTCAGAAGATAAAAGAGCAAAGACCAAGGTAACAGAGAAGAAAAACATTCGCCTTGTTGTTCTTCAAGCTGAACTGGAGCGAATGAAATTGGAGAATCAGCGGTTGAAAGACATGTACGATCTGGCGACCAACAATTACAATGCCTTGCATCTCCATTGGGTGAGTTTGATTCAGGGGCAGCGAGCTGATCAGAAAATTGCGGAGACTGTAGATGCATCGGGTGGAAGAGTAGAAGAGAAGAAACACAGTGCAAATAAGGGTGTAGTGGCGCCACGGACATTTATGGATCTGGGGTTGGCTTCTAATGCTGATAAAGATGAGTTATCAAATTCTTCATCAGATGAAAGAAGCCAGGACGTTTCAAGATCGTCAGGAACTAATGGAGAAGTGGGTTCCAAGGAATCAGCTTTCAGGAAGAATGGAACAAACGATGAAGCTGGAATAGAGTTTGATCATGATAAGAAGCGATTTGGTAGGGGACTGAGAAGGGGGGAAGATAGCCCTGAACAAGGTAATAGTCCCAATAAGTCTGCTAGGTTCAGTCCTGCAAAGAATGTTGATCAAACAGAAGCAACCATGAGGAAAGCTCGTGTTTCTGTTCGAGCTCGCTCTGAGGCACCGATGATCACAGATGGTTGTCAATGGCGGAAGTATGGACAGAAGATGGCCAAGGGAAATCCGTGTCCTCGAGCTTATTATCGCTGCACCATGGCTGCCGGTTGTCCAGTGAGAAAGCAAGTACAAAGGTGTGCGGAAGATCGAAGCATCCTCGTCACAACATACGAAGGCAACCACAACCACCCTTTGCCTCCAGCAGCCATGGCAATGGCACAGACCACTTCCTCTGCTGCACGAATGTTGCTTTCAGGATCCATGTCAAGCAGTGATGGCCTTATGAACTCAAATTTCCTCACCAGGACGCTTCTGCCTTGCTCTTCAAGCATGGCAACTATTTCAGCTTCGGCTCCTTTCCCTACAATTACATTAGACTTGACTCAGTCTTCAAACCCTTCGCAGTTCCAAAGGCAACCAAACCAGTTCCACATCCCATTTCCAAATGGACCTCAGAATTTTCTGAACTCTCCTGCCTCGCTCTTGCCTCAAATATTTGGTCAGGCTCTCTGCAACCAATCCAAGTTCTTAGGCCTTCAAATGTCTGAAGATGCAGACCCTTCTCAATCGAGCCACCCGCCACCTGCACAGTTAGCTGATTCAGTCAGTGCTGCCATTGCAGCGGACCCAAACTTCACGGCAGCTCTTGCCGCAGCCATCAGTTCTATCATTGGTGGCGCTCGTCCAAACAACAACAGCAGCAGCACCAGTGCCAACTTCAACACTGCTAATAACAATAGCAACGGCAACACCACAACTAGTAGCAGCTGTCAACAACAACAATGGAAGCAATAA 1749 0.4614 MDNALNNPNILKNNNPRRTSPPSTIQFPVNLNCSHDYHNSPVPSGDKHRIMDAMDFFPEHNKKGDDDKLASTSAYAETFDNSAPLVLELKTGLHLLTTNTGSDESVVDDGLSPNSEDKRAKTKVTEKKNIRLVVLQAELERMKLENQRLKDMYDLATNNYNALHLHWVSLIQGQRADQKIAETVDASGGRVEEKKHSANKGVVAPRTFMDLGLASNADKDELSNSSSDERSQDVSRSSGTNGEVGSKESAFRKNGTNDEAGIEFDHDKKRFGRGLRRGEDSPEQGNSPNKSARFSPAKNVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRSILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNSNFLTRTLLPCSSSMATISASAPFPTITLDLTQSSNPSQFQRQPNQFHIPFPNGPQNFLNSPASLLPQIFGQALCNQSKFLGLQMSEDADPSQSSHPPPAQLADSVSAAIAADPNFTAALAAAISSIIGGARPNNNSSSTSANFNTANNNSNGNTTTSSSCQQQQWKQ* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00974 582 Gene3D WRKY domain 308 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g00974 582 SUPERFAMILY WRKY DNA-binding domain 316 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte15g00974 582 FunFam probable WRKY transcription factor 31 308 385 - -
Pte15g00974 582 MobiDBLite consensus disorder prediction 215 306 - -
Pte15g00974 582 ProSiteProfiles WRKY domain profile. 318 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g00974 582 MobiDBLite consensus disorder prediction 228 251 - -
Pte15g00974 582 SMART WRKY_cls 323 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte15g00974 582 MobiDBLite consensus disorder prediction 252 280 - -
Pte15g00974 582 Coils Coil 127 159 - -
Pte15g00974 582 MobiDBLite consensus disorder prediction 1 24 - -
Pte15g00974 582 MobiDBLite consensus disorder prediction 99 120 - -
Pte15g00974 582 MobiDBLite consensus disorder prediction 282 302 - -
Pte15g00974 582 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 104 558 IPR044810 GO:0003700
Pte15g00974 582 MobiDBLite consensus disorder prediction 543 582 - -
Pte15g00974 582 Pfam WRKY DNA -binding domain 325 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00974 Pte-Chr15 7178481 7181496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00974 5 544 WRKY Transcription Factor Family AT1G62300 46.194 6.66e-132 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte15g00974 WRKY 2.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00974 - - qsa:O6P43_028660 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00974 15 7178481 7181496 Pte9g01296 9 34384053 34386670 RCT
Pte15g00974 15 7178481 7181496 Pte2g00439 2 3408636 3411450 RCT
Pte15g00974 15 7178481 7181496 Pte15g00974 15 7178481 7181496 RCT