Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00973 ATGGAATGGAACAGGGGGCATATTCTAGGCCGGGGTTCATCAGCCGCTGTTTCCCTCGCCAGCCGCAGTGGTGGTGATGTCTGTGCTGTCAAGTCAGCTGAACTATGCCACTCAGAGTTGTTGCAGAGAGAGCGGGAAATGCTTTCTACTTTGAGCTCTCCCTATGTGGTTGATTACAGAGGATGGGATGTCACTAAGGAGAACAACAAGCTCATGTATAATATTTTCATGGAGTACATGGCGGATGGTACTCTAACTGAAGCAATTCGCAGGCACGGTGGTCGGCTTGAAGAGTCCATGATTGCTTTCTATACGAAACAAGTTCTTCAGGGGCTGGAGTACTTACATTCAAATGGAATAGTACATTGTGACATTAAAGGTAGCAATATTTTGATCAGTCAAGAAAACCAAGCTAAAATTGCGGACTTTGGATGTGCTAAGCGGGTTGAGGATTCAGGGAAGGCGGAGCCAATGAGAGGCACGCCCATGTTTATGGCACCAGAGGTGGCGCGCGGCGAAGAACAAGGGCACCCTTGTGATATTTGGGCACTTGGATGTACAGTTATTGAAATGGCAACAGGATCATCACCTTGGACTCATGTTATTGACCCGGTTTCAGTTCTTTATCGGATAGCATATTCCGGCGAATCGCCTGAGATTCCAAGCTTTCTATCCCGCGAAGCAAAGGATTTCTTGGGGAAATGCTTGAAGAGAAATCCAAAGGAGAGGGCGTCGGCCGCCCAACTCATTAGGCATCCGTTTCTCGAGATATACAACGGGAGAACAAAACAGATACATGAATCAAATTCTAGCTCTCCTACAAGTATTCTTGATCAGTGTTTTTGGAATTCAGTCGTGGAATTGGATACGTCATCAAGCAACCTGAATTCTACAAGTTTTGAACATTCTCCCGCTGATAGAGTCCAACAATTGGCCTTCGTTTCAGGTGAACCCAGTTGGACATGGGATGAGAATTGGGTCACTATTAGAGAGGATAGATTTGAGGTTGTAGTTGAAGGGAACACGAATTTACAGACCGAGACAGCTTCAACTAACTGGAGTGTGCAAGAATTGGTAAAAAGCAATAATGATAGCTGTAGAAGAACTACTGGAAATTACATGGGTGATTACAACGGTAGAAAAGTTAAATCTGTAATTAGAACGCTCAAACTTGAGTTTGAGATAGGTATTGATAACATGTTACCTCATTCAATATCAGCATGTTTATAA 1230 0.4415 MEWNRGHILGRGSSAAVSLASRSGGDVCAVKSAELCHSELLQREREMLSTLSSPYVVDYRGWDVTKENNKLMYNIFMEYMADGTLTEAIRRHGGRLEESMIAFYTKQVLQGLEYLHSNGIVHCDIKGSNILISQENQAKIADFGCAKRVEDSGKAEPMRGTPMFMAPEVARGEEQGHPCDIWALGCTVIEMATGSSPWTHVIDPVSVLYRIAYSGESPEIPSFLSREAKDFLGKCLKRNPKERASAAQLIRHPFLEIYNGRTKQIHESNSSSPTSILDQCFWNSVVELDTSSSNLNSTSFEHSPADRVQQLAFVSGEPSWTWDENWVTIREDRFEVVVEGNTNLQTETASTNWSVQELVKSNNDSCRRTTGNYMGDYNGRKVKSVIRTLKLEFEIGIDNMLPHSISACL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00973 409 FunFam Mitogen-activated protein kinase kinase kinase 17 2 307 - -
Pte15g00973 409 Gene3D Transferase(Phosphotransferase) domain 1 2 319 - -
Pte15g00973 409 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00973 409 Pfam Protein kinase domain 5 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00973 409 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00973 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Pte15g00973 409 CDD STKc_MAPKKK 2 255 - -
Pte15g00973 409 SUPERFAMILY Protein kinase-like (PK-like) 3 289 IPR011009 -
Pte15g00973 409 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 316 - -
Pte15g00973 409 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00973 Pte-Chr15 7174233 7175850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00973 3 330 MAP Kinase Kinase Kinase AT5G55090 50.585 1.05e-112 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte15g00973 Pkinase 1.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00973 K20716 - qsa:O6P43_000561 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00973 15 7174233 7175850 Pte9g01130 9 33046537 33047334 RCT
Pte15g00973 15 7174233 7175850 Pte2g00437 2 3397240 3398751 RCT
Pte15g00973 15 7174233 7175850 Pte15g00973 15 7174233 7175850 RCT