Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00960 ATGGTGGATCGTCAAGCTCTGGCAAGAATGAAACCATCCGTTGCTATTGTTCATACGCTAATTATGATTTGGGTTTCTGTAAATGGATCCGTTAACTGCCGAAGCCCTACTATTCTCAACGTTGGTGCTATTTTCACTTTCGACTCGGTCATAGGCAGGGCTGCAAAGATAGCTATGGAAGCTGCCGTTTCTGACATCAATGCTGACCCAACAGTTCTTCCTGGAAAAAAGCTTAATTTGATTATGGAAAACGCAAATTGTAGTGCTTTCATGGGGTCAATGGCAGCTTTTCAGGTGCTGGAAAAGGAGCTTGTAGCCATAATTGGTCCTCAGTCATCTGCAATAGCTCACATACTTTCTCAGATTTCTGATGGTCTCCGAGTGCCCCTAATATCATATGCCGCTACTGATCCAACTCTCTCCGCTCTTCAGTTTCCTTTCTTTATTCGAGCCAGTCAGAGTGATGCTGTGCAAATGTCTGCCGTAGCTGATTTGATTGACTTTTATGGTTGGAAAGAGGTCATTGTTGTATATGTGGATGATGATTATGGAAGAAATGGAGTATCTGGATTAGCTGACGAACTTGAGAAAAGAAAATTAAAAGCTGCATACAAATTACCTTTAAGTGTTCAATTTGATGTGGATGAGATTACTCGTGTGCTTAATCACTCTAAAGTCTTCGGTTCACGTGTGTATGTTGTTCATGTTAACCCTGACCCTAAATTGAGAATTTTTTCTATAGCTCAGAAACTACAAATGATGACCACTAATTATGTTTGGTTTGCAACGGATTGGCTTTCTACCACTCTTGATTCGTTCTTGACAATCAACCAAACTTCAACCCAAATCATCCAAGGTGTTGTTGGGCTTCGTCAGCACGCGCCAGATTCTAGGCTGAAGAGAGATTTTGTGTCTAGGTGGGTAGAAATGCAACATAAGGGTGCAACTAGTTCCGGCTTGAACTCCTATGGACTCCAGGCTTACGATACAGTTTGGACAGTAGCACGTTCATTAGATAAATATATTAAAGTCCACAGAAACATCACATTTTCAAGTGATGGTAGCTTGCTTAAATCAAAAGCATCCGGTATTCAGCTCAATAAGCTTAAAACATTTAATGGTGGATCTTCTCTAGTCAACATAATGCTGCAAACCAACTTCACTGGTGTAAGTGGTCGAGTTCAGTTTAACACTGAGAGGAACATCGCAAGTGGTGGTTATGATATTATTAACATCAAGGAGACGGGAATTAGCATGATTGGATATTGGTCTAATTGTACAGGCTTTTCAACTGAGCCACCCGAGACTCTTACAGGGAAAGATGATTTCAGCCAAAAGCAGATGCTTGGCAATGTCACTTGGCCTGGTGGAAAGAGAGAGAGGCCACGAGGATGGGATTTTGCAAATAGTGAAAGACCATTGAGGATTGGGGTGCCGAAGAGAGAAAGTTTTGTTGAATTCGTTACTGAACAAAATGATAGCCACAAAATCCAAGGGTATTGTATTGATGTTTTCTTAGCAGCAGTGAGATTAATACCATATGAAGTTCCCTACACTTTTGAGATGTTTGGTGATGGCAAGTCCAATCCCCATTACGATAAGCTTGTGAAGATGGTTGCAGAAAATGTGTTCGATGCTGCTGTGGGGGACATTACAATAGTAACAGAACGGATAAAGATGGTAGACTTTTCCCAGCCTTATGCAAGTACTGGTCTTGTCATAGTTGCTCCTGTAGACAGACAAAAGTCAAATGCTTGGGTGTTCCTAAGACCATTTTCTGTGGGCATGTGGTGTGTGACTGCGGCATCATTTTTCCTGATTGGTGTTGTCATATGGATTCTTGAGCACCGAGTGAACGATGATTTCCGTGGTCCCCCCAAGAGGCAAATTTTAACAATGTTTCTGTTTGCCTTCTCCACGCTCTTTAAGACAAACAAGGAGAATACTGTTAGCCCACTTGGTCGGATGGTGATGGTGGTATGGCTTTTTGTGTTGATGGTGATCTCTAGTAGCTATACGGCAAGCTTGACTTCATTTCTTACTGTTCAGCAGCTTTCGTCCACCATTACTGGACTTGAAAGCTTGATTGTCAATGATTGGCCTATTGGTTACCAGGTTGGATCATTTGCGCATAGCTATATGACTGAAAGTCTCAATATACATAGATCAAGACTCATTCCCCTTGGCTCCCCTGAAGAATATGAGTGGGCTTTGCGTCAAGGACCGACTAATGGAGGAGTGGCAGCTATAGTAGATGAGCTTCCATATGTAGAGCTGTTCCTGTCGATGCACACTGATTTTGCTATTATTGGGCAGACTTTCACCAAAGGTGGATGGGGATTTGCATTTCAACGAGATTCTCCTCTTTCTACTGACATGTCCACTGCTATCTTGAAACTCTCTGAAAATGGAGAACTTCAAAACATCCATGACAAGTGGTTCTGTAAGATGGATTGTCCTGGAGAAAGAACACCGGATAATGAGCCCGACCAACTAATATTGTCTAGCTTTTGGGGTTTGTACTTATTATGTGGTGCTGTCGCTGCCACTGCTCTTGTGATGTTCTTGGTGCGAACAGCCTGCCAATTTGCCAGTCACAAGAAGCGGCAGGAGGGGTCTCTCCAATCTCTATCCTTAGAACCATCATCTGGAAGTCGTTGTTCACATGTCATCCAAAGCTTCATTGACTTCGTTGACGAGAAGGAAGAGGCAATCAAGAAAATGTTTACCCCATGTGATCATCCTCAAGGGGGGTAA 2757 0.4258 MVDRQALARMKPSVAIVHTLIMIWVSVNGSVNCRSPTILNVGAIFTFDSVIGRAAKIAMEAAVSDINADPTVLPGKKLNLIMENANCSAFMGSMAAFQVLEKELVAIIGPQSSAIAHILSQISDGLRVPLISYAATDPTLSALQFPFFIRASQSDAVQMSAVADLIDFYGWKEVIVVYVDDDYGRNGVSGLADELEKRKLKAAYKLPLSVQFDVDEITRVLNHSKVFGSRVYVVHVNPDPKLRIFSIAQKLQMMTTNYVWFATDWLSTTLDSFLTINQTSTQIIQGVVGLRQHAPDSRLKRDFVSRWVEMQHKGATSSGLNSYGLQAYDTVWTVARSLDKYIKVHRNITFSSDGSLLKSKASGIQLNKLKTFNGGSSLVNIMLQTNFTGVSGRVQFNTERNIASGGYDIINIKETGISMIGYWSNCTGFSTEPPETLTGKDDFSQKQMLGNVTWPGGKRERPRGWDFANSERPLRIGVPKRESFVEFVTEQNDSHKIQGYCIDVFLAAVRLIPYEVPYTFEMFGDGKSNPHYDKLVKMVAENVFDAAVGDITIVTERIKMVDFSQPYASTGLVIVAPVDRQKSNAWVFLRPFSVGMWCVTAASFFLIGVVIWILEHRVNDDFRGPPKRQILTMFLFAFSTLFKTNKENTVSPLGRMVMVVWLFVLMVISSSYTASLTSFLTVQQLSSTITGLESLIVNDWPIGYQVGSFAHSYMTESLNIHRSRLIPLGSPEEYEWALRQGPTNGGVAAIVDELPYVELFLSMHTDFAIIGQTFTKGGWGFAFQRDSPLSTDMSTAILKLSENGELQNIHDKWFCKMDCPGERTPDNEPDQLILSSFWGLYLLCGAVAATALVMFLVRTACQFASHKKRQEGSLQSLSLEPSSGSRCSHVIQSFIDFVDEKEEAIKKMFTPCDHPQGG* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00960 918 Gene3D - 57 404 - -
Pte15g00960 918 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 866 IPR015683 -
Pte15g00960 918 FunFam Glutamate receptor 711 818 - -
Pte15g00960 918 Gene3D - 585 717 - -
Pte15g00960 918 Pfam Receptor family ligand binding region 56 414 IPR001828 -
Pte15g00960 918 Pfam Bacterial extracellular solute-binding proteins, family 3 492 814 IPR001638 -
Pte15g00960 918 PIRSF IGluLR_plant 9 915 IPR017103 -
Pte15g00960 918 Gene3D - 154 428 - -
Pte15g00960 918 CDD PBP1_GABAb_receptor_plant 40 433 IPR044440 -
Pte15g00960 918 FunFam Glutamate receptor 154 313 - -
Pte15g00960 918 Gene3D - 718 817 - -
Pte15g00960 918 SUPERFAMILY Periplasmic binding protein-like I 33 465 IPR028082 -
Pte15g00960 918 CDD GluR_Plant 472 814 - -
Pte15g00960 918 FunFam Glutamate receptor 585 715 - -
Pte15g00960 918 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 52 68 - -
Pte15g00960 918 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 112 140 - -
Pte15g00960 918 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 243 266 - -
Pte15g00960 918 SMART GluR_14 475 816 IPR001320 GO:0015276|GO:0016020
Pte15g00960 918 SUPERFAMILY Periplasmic binding protein-like II 452 814 - -
Pte15g00960 918 FunFam Glutamate receptor 469 585 - -
Pte15g00960 918 Gene3D - 464 584 - -
Pte15g00960 918 Pfam Ligand-gated ion channel 815 846 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00960 Pte-Chr15 7076719 7082233 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00960 10 913 Ion Channels AT2G32400 54.345 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00960 K05387 - cave:132180854 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00960 15 7076719 7082233 Pte15g00960 15 7076719 7082233 RCT