Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00958 ATGGAGGTCCTATTGATTAGAAGGCATAGTCATGCTATCCTGGCATTATTACAAGCTTTGTTTGGAGTAATTTGTGTGTGGACTCCAATGGAAGTCATGGGTGGCACTGGAAATGCTAGTGCTGCTTCAAGGCCGAGTTCTGTGAATATAGGAACTCTGTTCACTTATAATTCAGTCATCGGAAGATCTGCCAAACCAGCAATTAGAGCTGCAGTTGATGATGTTAATGCTGATTCAACCATCCTTGGAGGGACTAAATTGAATGTGATTTTCCATGACACGAACTGCAGCGGATTTCTTGGAACAATTGAAGCTTTGCAGCTGATGGAGAAAGATGTTTTTGTTGCTATCGGTCCACAATCTTCTGGCATAGCTCATATCATCTCCCATGTTGTCAATGAACTTCATGTGCCTCTTCTGTCATTTGGAGCAACAGATCCCACACTTTCTTCTCTGCAGTATCCCTTTTTCATTCGAACAACACAAAGCGACTATTTTCAAATGTACGGAATAGCTGACTTTATTGATTACTACGGATGGAGAGAGGTGGTTGTCATCTTTGTTGATGATGAATATGGAAGAAGTGGAGTTTCAGTATTGGGTGATGCTCTAGCGAAGAAGAGGGCTAAGATCACTCACAAGGCTGCCTTCCCTCCAGGAGCATCTATAAGTGTGATTAATGACTTGTTGGTTCAAGTAAACTTATTGGAATCTCGAGTCTATGTTCTGCATGTTAATCCGGACTCCGGTTTAAACATTTTTGCTGCCGCCAAGCATCTTGGGATGATGGAAAGTGGTTATGTTTGGATTGCAACAGATTGGCTTCCATCCGTACTGGATTCCAAGCAGCCAGCTGATCCTGATACAATGAGTCTCTTACAAGGAGTTATTGCTTTTCGCCATCATACCCCAGATAGTGACATGAAAAAAAAATTTGTTTCAAGGTGGAAGAATCTGAACTACTCACAGACACCAAGCTTCAATTCTTATGCATTATATGCATACGACTCCGTTTGGTTAGCTGCTCGTGCTCTTCACAGCTTCTTTAATGCAGGGGGAAATTTATCCTTCTCAAGCGATCCACGGTTGCGTGACACAAATGCAAGCTCCTTGCACTTGGCATCATTGCGTATCTTTGATGCTGGACAACAGTTTTTGCAAACAATTTTGGGGATGAATTTCACAGGGCTAAGTGGTCAAATTCAGTTTGATTCGGAAAAAGATTTGGTTCATCCAGCTTACGACATTCTAAACATCGGTGGCAATGGATTCCGCACTGTTGGTTATTGGTCTAATTATTCTCATCTTTCAGTCATTGCACCTGAAATATTATACACGAAACCACCGAATACATCAACTAGCAGCCAGCATCTTTACAGTGTAATATGGCCGGGTGAAACTGCGACTATTCCTAAAGGATGGGTATTCCCAAACAATGGAAAGCCACTAAGGATAGCTGTTCCGAACCGGGTGAGCTACAAGGATTTTGTCTCCAAAGACAAAGACCGAGGGGTGAAAGGTTATTGCATTGATGTCTTTGAAGCTGCTGTTCAGTTGTTGCCTTATCCTGTCCCAAGGAGTTATATACTTTATGGACATGGTGATAGAAATCCTGACTACAATGACCTTGTGAATCAGGTGGCACTTAATAATTTTGATGCTGTGGTTGGAGATGTTACCATAGTTACCAACAGGACAAGGATTGTAGATTTTACACAACCTTACATGGAATCAGGGCTCGTCGTAGTTGTTCCAGTCGTGCAGGAGAAGTCAAGTCCTTGGTCTTTCCTTAAGCCATTTAGTCTGGCAATGTGGCTTGTGACTGGTGCATTCTTCCTTTTCGTGGGAGCTGTAGTATGGATTCTTGAGCACAGGATTAACCATGAGTTCCGTGGTCCACCTAGGAAACAACTTATAACCATTTTCTGGTTTAGTTTTTCAACGATGTTTTTCTCACACAAAGAAAACACTGTGAGCACTCTTGGACGATTAGTGCTGATAATATGGCTATTTGTGGTGCTGATCATCAATTCAAGTTACACAGCTAGTTTGACCTCAATTCTTACAGTGCAGCAATTGACATCAAGAATTGAAGGAATCGATAATCTTGTCTCCGGAACCGATCCAATTGGAGTTCAAGATGGCTCATTTGTGCGGAAGTATCTTGTAAATGAACTCAATGTACAAGAATCTAGGCTTGTGACTTTGAAAACACAGCAGGATTACGTTAACGCCCTTCAGCGAGGACCAAATAATGGAGGGGTGGCTGCCATTGTTGATGAACTCCCTTATATTGAGCTTTTCTTATACGATACCCAATGTCAGTTCAGAACTGTAGGCCAGGAGTTCACCAGAAGTGGCTGGGGATTTGCATTCCAAAGGGATTCACCTCTTGCAGTTGACCTGTCAACTGCAATTCTTCAACTCTCAGAAAATGGTGAACTGCAAAAGATTCATGATAAATGGCTCTTACGTGGAGAGTGCTCCATGCAAATCGATGAAGTCGATGACAACAGGCTATCTCTGAAAAGCTTCTGGGGTCTTTTCCTCATAAGTGGGATTGCATGCCTTATAGCTTTGATTATATTTTTCAGTAGAGTGGTTTATCAATTTCTAAAGTTCAGTCCCGAGGTTCAGGAGGTTGATGAGGAAATTGAACCAGCCAGAACTAGAAGGACAAACAGGACGACTAGTTTTAAGGACTTGATGGAGTTTGTAGATAAGAAGGAAGCAGAGATCAAGGAGATACTAAGGCGAAAAAGTATTGACAGAGGACAGCACAGTCAGAGTTCAGATGGGCAGTTTCATTCTCCTTCCTAA 2820 0.4216 MEVLLIRRHSHAILALLQALFGVICVWTPMEVMGGTGNASAASRPSSVNIGTLFTYNSVIGRSAKPAIRAAVDDVNADSTILGGTKLNVIFHDTNCSGFLGTIEALQLMEKDVFVAIGPQSSGIAHIISHVVNELHVPLLSFGATDPTLSSLQYPFFIRTTQSDYFQMYGIADFIDYYGWREVVVIFVDDEYGRSGVSVLGDALAKKRAKITHKAAFPPGASISVINDLLVQVNLLESRVYVLHVNPDSGLNIFAAAKHLGMMESGYVWIATDWLPSVLDSKQPADPDTMSLLQGVIAFRHHTPDSDMKKKFVSRWKNLNYSQTPSFNSYALYAYDSVWLAARALHSFFNAGGNLSFSSDPRLRDTNASSLHLASLRIFDAGQQFLQTILGMNFTGLSGQIQFDSEKDLVHPAYDILNIGGNGFRTVGYWSNYSHLSVIAPEILYTKPPNTSTSSQHLYSVIWPGETATIPKGWVFPNNGKPLRIAVPNRVSYKDFVSKDKDRGVKGYCIDVFEAAVQLLPYPVPRSYILYGHGDRNPDYNDLVNQVALNNFDAVVGDVTIVTNRTRIVDFTQPYMESGLVVVVPVVQEKSSPWSFLKPFSLAMWLVTGAFFLFVGAVVWILEHRINHEFRGPPRKQLITIFWFSFSTMFFSHKENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSRIEGIDNLVSGTDPIGVQDGSFVRKYLVNELNVQESRLVTLKTQQDYVNALQRGPNNGGVAAIVDELPYIELFLYDTQCQFRTVGQEFTRSGWGFAFQRDSPLAVDLSTAILQLSENGELQKIHDKWLLRGECSMQIDEVDDNRLSLKSFWGLFLISGIACLIALIIFFSRVVYQFLKFSPEVQEVDEEIEPARTRRTNRTTSFKDLMEFVDKKEAEIKEILRRKSIDRGQHSQSSDGQFHSPS* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00958 939 FunFam Glutamate receptor 163 323 - -
Pte15g00958 939 Gene3D - 478 591 - -
Pte15g00958 939 PIRSF IGluLR_plant 11 938 IPR017103 -
Pte15g00958 939 MobiDBLite consensus disorder prediction 919 939 - -
Pte15g00958 939 FunFam Glutamate receptor 719 827 - -
Pte15g00958 939 FunFam Glutamate receptor 593 723 - -
Pte15g00958 939 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 48 889 IPR015683 -
Pte15g00958 939 Gene3D - 719 825 - -
Pte15g00958 939 CDD PBP1_GABAb_receptor_plant 49 438 IPR044440 -
Pte15g00958 939 Gene3D - 67 411 - -
Pte15g00958 939 Gene3D - 592 718 - -
Pte15g00958 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 61 77 - -
Pte15g00958 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 334 346 - -
Pte15g00958 939 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 121 149 - -
Pte15g00958 939 SMART GluR_14 484 825 IPR001320 GO:0015276|GO:0016020
Pte15g00958 939 Gene3D - 163 436 - -
Pte15g00958 939 FunFam Glutamate receptor 478 593 - -
Pte15g00958 939 SUPERFAMILY Periplasmic binding protein-like I 42 475 IPR028082 -
Pte15g00958 939 SUPERFAMILY Periplasmic binding protein-like II 458 824 - -
Pte15g00958 939 Pfam Ligand-gated ion channel 824 856 IPR001320 GO:0015276|GO:0016020
Pte15g00958 939 CDD GluR_Plant 481 823 - -
Pte15g00958 939 Pfam Receptor family ligand binding region 65 420 IPR001828 -
Pte15g00958 939 Pfam Bacterial extracellular solute-binding proteins, family 3 492 823 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00958 Pte-Chr15 7060383 7065250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00958 44 793 Ion Channels AT1G05200 69.907 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00958 K05387 - qsa:O6P43_028681 1461.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00958 15 7060383 7065250 Pte15g00958 15 7060383 7065250 RCT