Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00949 ATGCCTCCCAAGCGGCCCTTGTCAAATCCACCTCCTCCTTCTTCTTCTGAAGATGAAGAACAATCCGAGACTGAAGACGAGCAAGAACCGGAACAGATGCAAGCACAATCAAATGGTGGACTGGAGGAAGTGGAGGAGAAGTCTGATGACGAAGAGGAAGGAGAGGAGGACAATGATGATGATGAAGAACAGAAATCAGCTCCCAAAGTTACGGCTTCAAAAGCCAATCTTCCTATGGACGATGATTCGGGATCGGAAACTGAAACCGATTCCAGTAACTCCCGACCTTCCCAATCGGCTTCTGACTTTGCTATTGCGCCGATTACTTCAAAGCCGATGGACGATTCGGCTAAACCGAGGAGAGACTCAGTCAAGCGCAATCTCAAGACGTCGCCGGTTGCCACTCCCACAAGAAGCGTTGGGTCGAAGCGTGAGAACGAGAGTGATGTCGAGAAGAAGGACCACAAGAAGAAGAAGGCGGCCAATGGTTTGGATGAGGAAGATGCTAAAAAGAACACTGGGTTTCAGCGAGTCTGGAGCGAGGAGGATGAAATTGAAATACTGAAAGCCATGATTGACTATCGAATGAAGAAAGGGTCTGAACCTAACACTGACATGGGTGCTTTTTACGAATTTGTAAAGAAACGAATTAATGTGAATGCGTCAAAGAGTCAAGTGATTGATAAAATTAGAAGATTGAAGAAGAAATATCAAAACTATGCAGATAAAAGTGTGGATGGCAAGGATCCAATTTTACCTAGGCCTCATGAGTATCTCACCTATGAGCTTTCTAAAAAGATATGGGGTCCTGATAAGATCGAACGTGGTGAGAAGAATAAGACAAAGACAGGAGCTGGACAGAGTAGCAAAGCTAAGAATGATAATTCTCCTACAAGAAGGAAAAATGTGGAGGCTAATTGGGTGGTTCCGGTTAAAGCTAATGGCGATGCCCATGCGGTGAGACATGAGGACTTCTCCATAAACTCTGCCCTTTTGTCAGTATTGGCATTAGAGAACATTTCCTCACACCCAGAGGCTGCCTCGAGTTTTGTCAGAAAGGCACTACCTTTGATTGATACTGTCAAGGCTAAGGAGTTTGATAAAAGCTGGAAGGAATTGCAAAGGGAACAGTTCCAATTGTTCATGAAAAAGACTAGCTTGATACTTGATGGTGCGAAGCTAGTGCTGGAGGCAATGAAGTCATCTGACAACTGA 1215 0.4486 MPPKRPLSNPPPPSSSEDEEQSETEDEQEPEQMQAQSNGGLEEVEEKSDDEEEGEEDNDDDEEQKSAPKVTASKANLPMDDDSGSETETDSSNSRPSQSASDFAIAPITSKPMDDSAKPRRDSVKRNLKTSPVATPTRSVGSKRENESDVEKKDHKKKKAANGLDEEDAKKNTGFQRVWSEEDEIEILKAMIDYRMKKGSEPNTDMGAFYEFVKKRINVNASKSQVIDKIRRLKKKYQNYADKSVDGKDPILPRPHEYLTYELSKKIWGPDKIERGEKNKTKTGAGQSSKAKNDNSPTRRKNVEANWVVPVKANGDAHAVRHEDFSINSALLSVLALENISSHPEAASSFVRKALPLIDTVKAKEFDKSWKELQREQFQLFMKKTSLILDGAKLVLEAMKSSDN* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00949 404 MobiDBLite consensus disorder prediction 44 62 - -
Pte15g00949 404 MobiDBLite consensus disorder prediction 89 105 - -
Pte15g00949 404 MobiDBLite consensus disorder prediction 1 175 - -
Pte15g00949 404 PANTHER BNAANNG10740D PROTEIN-RELATED 12 398 IPR007592 GO:0006355
Pte15g00949 404 MobiDBLite consensus disorder prediction 272 301 - -
Pte15g00949 404 MobiDBLite consensus disorder prediction 142 175 - -
Pte15g00949 404 Pfam Protein of unknown function, DUF573 175 269 IPR007592 GO:0006355
Pte15g00949 404 Coils Coil 223 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00949 Pte-Chr15 6970504 6972779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00949 80 400 GeBP Transcription Factor Family AT1G61730 30.816 1.88e-32 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte15g00949 DUF573 3.8e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00949 - - qsa:O6P43_000617 298.516