Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00946 ATGTCCGTGACTGAGTTACCAGAGTACGTTGGTTTAATCCCTTGCTGTAGTTTTGGTTTTTGTGCATCAAACAACGCCATTTTTAAAGCTACTCAAGGTTTCCCTAGAGTTAATGTCTTAGGTTTCAGCATCCCTCACTGTATGCAGTGGCTTACGATCACTGATGCTTTGGCTAAAAGAGATGAAGGGCCTCCTTCACTCAGAATAACTGTACCTTCTAGTAGGCCACCCGTCCCTCCCTTTGTTAATGTGTCTACTGAAGAATTCCGACTTCGTTTGAGTAATTTTGCTAAGTCTAAGGAAGTTCCTTTCGAATTCAATGTGATAGGAAGTTCTTCTTCATCAACTTATTTTCAGCTTGGAGAAGAGTTTAACTTTGAAACTCTATTAACTCACTTGAACCCTTCTGCTTTAAACTTTAAGGATGATGAAGCTTTAGTGATAAATTGCCAAAATTGGCTGCGTTATCTGAGGGACGAAGATTGTGCTCAACCAACTTCATATTTCGAGAAACTTTTGTGA 522 0.3966 MSVTELPEYVGLIPCCSFGFCASNNAIFKATQGFPRVNVLGFSIPHCMQWLTITDALAKRDEGPPSLRITVPSSRPPVPPFVNVSTEEFRLRLSNFAKSKEVPFEFNVIGSSSSSTYFQLGEEFNFETLLTHLNPSALNFKDDEALVINCQNWLRYLRDEDCAQPTSYFEKLL* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00946 173 ProSiteProfiles GRAS family profile. 1 173 IPR005202 -
Pte15g00946 173 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 161 IPR005202 -
Pte15g00946 173 Pfam GRAS domain family 9 165 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00946 Pte-Chr15 6950409 6950930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00946 2 160 GRAS Transcription Factor Family AT3G49950 39.375 3.60e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte15g00946 GRAS 3.8e-27 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00946 - - qsu:111989272 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00946 15 6950409 6950930 Pte15g00946 15 6950409 6950930 RCT