Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00945 ATGTTAAGTTTGACATCAAGAATTGCCACATGTTTCAATTATCTATGGATCCCCTTTGATGCCTTAGAGACTTTCTTGCCTAAATATAGTTGCCGGAGATTAGAATATGAATCTGACATAGGCCAGCAAATAGAGAACATAATTGGGTTTGAAGGGATGTTAAAAATAGAGAGATTGGAGTCCGAAGGGAAACTGTCACCAAGGATGGAAAATGCTGGGTTCTTCAGCGTTCCATTTTTTGATGAGACTGTTCAGGAATTGAAGGCCTTGCTTGATGAGCATGCTAGTGGGTGGGGGATAAAGAGTGAAGAAGATACATTAGTCCTAACATGGAAAGGCCACAACTCTGCGTTTGCAACAGCTTGGGTCTCCAGTAGTATGAAATACTCAGACAAATGTTAA 402 0.4055 MLSLTSRIATCFNYLWIPFDALETFLPKYSCRRLEYESDIGQQIENIIGFEGMLKIERLESEGKLSPRMENAGFFSVPFFDETVQELKALLDEHASGWGIKSEEDTLVLTWKGHNSAFATAWVSSSMKYSDKC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00945 133 ProSiteProfiles GRAS family profile. 1 123 IPR005202 -
Pte15g00945 133 Pfam GRAS domain family 4 122 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00945 Pte-Chr15 6949946 6950347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00945 3 123 GRAS Transcription Factor Family AT3G49950 45.528 1.28e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte15g00945 GRAS 6.8e-20 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00945 - - mnt:21401273 205.682