Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00937 ATGAACAGAGAAATGAGGAGCTGCGAGCTTTGCTATACCCAAGCGAGTGCGTATTGTGAATCAGACGGGGCTAGCTTGTGCTGGAACTGTGATTCCAAGGTTCATGGGGCCAACTTTCTGGTAGCTAGGCATTCCAGGACTCTTCTCTGTCACTCTTGCCAATCCCATACACCATGGAAAGCCTGCGGTGCAAAGCTTGGGAATACTGTTTCATTTTGCGAGACTTGTACTGGTGGTATGGAAGAAGAAGAGAGCGAAGGTGTTATGGACGATGATGTCGGCACAGATAACGGCACTGATCTCGAAGAAGAAGATGACAGCGATGGTGTGGATCAATACCCTGAAAATGGCGAATCCTATCATGATGAAGACGACGAGGATGCTGAGGCTTGTGGTGATAGTCAAGATGGAGATCATGAAGTTGTGCCGTTGTCAAGAACGTCCCCACTGCCGCCGTCAACCAATTCATCTAGTAGCCACGAGTCCGCTTATCGGTTCCGTGACGATGGAGACTTTTCTGAATCAGTCTCGGCCTTCTCTATCAAAAGGATGCGTGAAAGTTCGTCGGATCTTCATCTTCAGGAAAATCTGCCATCATCTTCTGAGATGATGTACGATACAGAATGGATGAACAAGTCGGCGGTTCAATGTGAAGCTACGTGTGAAGAATTGTTGAGGCCGTTGAAAGATCGGAGACTCGGCACGGGTGGGACCAATACGAAATCTTCGTATAGAATTGTTTAG 744 0.4785 MNREMRSCELCYTQASAYCESDGASLCWNCDSKVHGANFLVARHSRTLLCHSCQSHTPWKACGAKLGNTVSFCETCTGGMEEEESEGVMDDDVGTDNGTDLEEEDDSDGVDQYPENGESYHDEDDEDAEACGDSQDGDHEVVPLSRTSPLPPSTNSSSSHESAYRFRDDGDFSESVSAFSIKRMRESSSDLHLQENLPSSSEMMYDTEWMNKSAVQCEATCEELLRPLKDRRLGTGGTNTKSSYRIV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00937 247 MobiDBLite consensus disorder prediction 81 166 - -
Pte15g00937 247 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 7 202 - -
Pte15g00937 247 MobiDBLite consensus disorder prediction 81 133 - -
Pte15g00937 247 CDD Bbox1_BBX-like 8 49 - -
Pte15g00937 247 MobiDBLite consensus disorder prediction 147 161 - -
Pte15g00937 247 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Pte15g00937 247 Pfam B-box zinc finger 4 46 IPR000315 GO:0008270
Pte15g00937 247 SMART bboxneu5 3 49 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00937 Pte-Chr15 6889182 6890977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00937 6 104 C2C2-CO-like Transcription Factor Family AT5G54470 56.566 3.85e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte15g00937 zf-B_box 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00937 - - qsa:O6P43_028736 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00937 15 6889182 6890977 Pte15g00937 15 6889182 6890977 RCT