Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00933 ATGGCGAGAACCCCTGGTTGTGACAATGGACTCAAGAAAGGCACATGGACACCTGAGGAAGACAGAAAACTGATTGCCTATGTTACAAGGTATGGCTGCTGGAACTGGCGCCAACTTCCCAGGTTTGCAGGTCTCTCCAGGTGTGGGAAGAGCTGCAGACTGAGATGGCTGAATTATTTAAGGCCCAACATCAAAAGAGGTAATTATACTAAAGAAGAAGAAGAGACAATAATCAAATTGCACAAGAAGCTAGGCAACAGATGGTCTGCCATTGCAGCTCATCTACCTGGAAGAACTGACAACGAAGTCAAAAATCATTGGCACACAAACCTGAAGAAACGAGATCAAGAAAATCATTCTAACTCTGAGAAAGCAACTGAATCGAAGTCAAAGGATGAGTACTACAAGTGCACAACTGAAAGTCAAACCTGCAGGAAAGCTGTAGATTCAGAATCTGATATTGTCAACCTCTTCAATTCAGCTACACCTCCAATTCTGGAAACAAGCTCTTTGTCCACACAAACATCCATGGGTGAAATCTCCCCCTCCTCCATAGACTCCTCAGCTGCAAGCTACGATCATTTTCCGGACGATGACTTCATGATGAATGAATTGGATAAACTTCTGTCAGATCCTATTGTGAACGACAATATGTGGACAGAATCTCTAATGGAAGAAAGTTGGTACACCATGAGTGACATATACACAGATACTGAATTTTCTTTTCCAGTATGTGATGGAGAGATTTTGATGGAGAATATCGTGTACGAGGAGTACCAGGGCTTATTTAGTTGA 795 0.4252 MARTPGCDNGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLSRCGKSCRLRWLNYLRPNIKRGNYTKEEEETIIKLHKKLGNRWSAIAAHLPGRTDNEVKNHWHTNLKKRDQENHSNSEKATESKSKDEYYKCTTESQTCRKAVDSESDIVNLFNSATPPILETSSLSTQTSMGEISPSSIDSSAASYDHFPDDDFMMNELDKLLSDPIVNDNMWTESLMEESWYTMSDIYTDTEFSFPVCDGEILMENIVYEEYQGLFS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00933 264 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Pte15g00933 264 SMART sant 65 113 IPR001005 -
Pte15g00933 264 SMART sant 12 62 IPR001005 -
Pte15g00933 264 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Pte15g00933 264 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pte15g00933 264 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pte15g00933 264 MobiDBLite consensus disorder prediction 110 132 - -
Pte15g00933 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pte15g00933 264 CDD SANT 68 111 IPR001005 -
Pte15g00933 264 CDD SANT 15 60 IPR001005 -
Pte15g00933 264 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pte15g00933 264 FunFam MYB-related transcription factor 12 65 - -
Pte15g00933 264 Gene3D - 67 140 - -
Pte15g00933 264 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Pte15g00933 264 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pte15g00933 264 Gene3D - 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00933 Pte-Chr15 6843995 6845407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00933 1 122 MYB Transcription Factor Family AT2G31180 67.480 8.76e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g00933 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00933 K09422 - qsa:O6P43_000644 275.789