Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00927 ATGGGAAGAGCACCTTGCTGTGACAAAGGTGGACTCAATAAAGGTCCATGGACACCCGAAGAAGATCAAATACTCATCAACTACATTCAAACTCATGGACCAGGCAATTGGCGTACACTTCCAAAGAACGCCGGGCTGCAAAGATGTGGCAAGAGCTGTCGACTTCGATGGACGAATTACCTGAGGCCTGATATCAAGAGAGGAAGATTTTCGTTTGAAGAAGAAGAAACTATTATCCAATTGCACAGCGTCTTAGGGAACAAATGGTCGGCTATAGCAGCTCGTTTGCCAGGAAGGACTGACAATGAAATTAAAAACTACTGGAACACACACATTAGGAAAAGGCTGCTTAAGATGGGAATTGATCCCGTTACTCATGCTCCGCGCCTTGATCTTCTTGACTTATCCTCAGCACTTAGCTTGGCTATGCATAACCCATCGTTTTTCAGCATGTCAAGCTTATTAGGTACACAAGCCCTCATTAACCCAGAGTTGTTGAAGTTGGTGAGCACTCTCTTATCGTTGAAAAGAGCAAACCCTGAGTTGTTCGCACAACATGTCCAACAAAGTCAACTCGGGAATATGTCTCAGTTACAGAGCCAAATCCCAGTATTACAAAACAATCATCAGTTTCAGACGGTAACCGATCAAGTCAATGTGGAAGGTCTCTTGTCCAATCTTACTGACTTCAGCTCTCAGAGATCCATATTACCAGAGAATATGCCTTCCTATTTACCTGAGAACTTTGTTACCCAACCTAACTTCGTTGAGTTACAAACTACCCCATGCTCTCCGCCACAAAACAACAATACCCTCCAAAATCTAAGCTATGACTCAGTTCTTTCTACACCTGTATCAAGCCCAACACCACTGAACTCATCGTCAACGTGTATCAACAGCAACAGTACTGAGGACGAGAGGAATAGCAATTGCAGCGATCTCTTCAAGTTTGAAATCCCAGGGAGTTTCGATATAAGTGACTTCTTGTAA 990 0.4354 MGRAPCCDKGGLNKGPWTPEEDQILINYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLKMGIDPVTHAPRLDLLDLSSALSLAMHNPSFFSMSSLLGTQALINPELLKLVSTLLSLKRANPELFAQHVQQSQLGNMSQLQSQIPVLQNNHQFQTVTDQVNVEGLLSNLTDFSSQRSILPENMPSYLPENFVTQPNFVELQTTPCSPPQNNNTLQNLSYDSVLSTPVSSPTPLNSSSTCINSNSTEDERNSNCSDLFKFEIPGSFDISDFL* 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00927 329 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte15g00927 329 CDD SANT 69 112 IPR001005 -
Pte15g00927 329 FunFam Transcription factor MYB39 69 130 - -
Pte15g00927 329 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pte15g00927 329 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte15g00927 329 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte15g00927 329 MobiDBLite consensus disorder prediction 281 309 - -
Pte15g00927 329 CDD SANT 16 61 IPR001005 -
Pte15g00927 329 Gene3D - 69 116 - -
Pte15g00927 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte15g00927 329 Gene3D - 14 66 - -
Pte15g00927 329 FunFam MYB-related transcription factor 13 66 - -
Pte15g00927 329 SMART sant 13 63 IPR001005 -
Pte15g00927 329 SMART sant 66 114 IPR001005 -
Pte15g00927 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte15g00927 329 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 273 - -
Pte15g00927 329 MobiDBLite consensus disorder prediction 281 308 - -
Pte15g00927 329 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte15g00927 Pte-Chr15 6809218 6810586 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00927 1 329 MYB Transcription Factor Family AT4G21440 49.030 1.14e-105 311
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte15g00927 Myb_DNA-binding 2.2e-15 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00927 K09422 - pvy:116107108 416.772