Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00910 ATGTCCTCTGGCATCCTACAACGATTCACAGTTTTTATCCCTCTCTTCTTTCTGGCTGTGTGGTTTGGAGAAGCACCTCCATGTCCAAGTACTTGTCAGTGTTCATACTTCAATGGCAGGAGTTGGCTCATCGATAGCAGGGGATTTGCAAATAAAGTCAGAAATGCTACTCTGCCTTCAGCTCATCAAATTAAAGACTGTGGAGCATTTAGGGAATGCCCCAATTGTCATCATTGGATAGACAATAAAGATGCATTTCCTGAGTGGCCTGGTCTTCCTGCTGGTGTGAAGTTTGACCCATCTGATACCGAACTTCTGGAGCACTTGGCTGCAAAATGTGGTGTTGAAAGCTCAAAACCTCACTCTTTTATCAATGAGTTCATCCCAACACTAGAGGGAGATGAAGGTATCTGCTACACTCATCCAGAAAATCTCCCAGGTGCTGTGAAAGATGGGAACAGTGTCCATTTCTTTCATCGGATAATCAAAGCGTATGCCACCGGTCAGCGGAAGCGTCGCAAGATTAATCATCGTAATTTGGTCCAGGAGCATGTTCGCTGGCATAAAACTGGCAAGACCAAACCTGTAATGGAAAATGGAATCCTGAAAGGCTTTAAGAAGATTATGGTCCTCTATGTAAGTTCAAAGAATGGATCCAAACCAAATAAATCCAATTGGGTTATGCATCAATACCATCTGGGCAGTGAAGAAGAAGAAAGGGAAGGTGAATATGTTGTTTCAAAGATTTTCTATCAACAGCCAAAGAAGATTGGAAAAACTGAGATTTTGATGCTTGAAGATACTGATAATGTGACAGCACAAACAAGTCCAAGAACTCCAAAAACATATCCCCCTAATCCTCCTCGTTCTGGGACATCTGCTCCATGTGATGCTGCTATTGAAGATGATCTGCCACCACTACCTGCGCAGGATATGGAGTGCAGAACAAAGGGTTTGCATGCCCCTCCTACTGATAATGCGGTCGGTGATGATGTGGGTGATCGTGCGTGGTTAGCTGGTGAATCACAAGCTGTTGAAAGTTCTGATTGGGCTTGCTTAGATGACTTGTTGCTATGCAGTGAGAATATTGACAGTTCGGCTCCACTGTATGAACCTGCGTTGGACCTCATTGCCTTCAATACTTTTGGTTGCATTGCAAAGGAAGTAAATAGAACTAATGTGTCCTGTGGAATTGCTGACCTGGAGAACCTTGAAATGGATTCTCCTCCAGATTTCCAGCTATCTAATTTGCAATTCTCATCTCAAGATAGTGTCTTCGACTGGATAGACAAGTTATGA 1299 0.4334 MSSGILQRFTVFIPLFFLAVWFGEAPPCPSTCQCSYFNGRSWLIDSRGFANKVRNATLPSAHQIKDCGAFRECPNCHHWIDNKDAFPEWPGLPAGVKFDPSDTELLEHLAAKCGVESSKPHSFINEFIPTLEGDEGICYTHPENLPGAVKDGNSVHFFHRIIKAYATGQRKRRKINHRNLVQEHVRWHKTGKTKPVMENGILKGFKKIMVLYVSSKNGSKPNKSNWVMHQYHLGSEEEEREGEYVVSKIFYQQPKKIGKTEILMLEDTDNVTAQTSPRTPKTYPPNPPRSGTSAPCDAAIEDDLPPLPAQDMECRTKGLHAPPTDNAVGDDVGDRAWLAGESQAVESSDWACLDDLLLCSENIDSSAPLYEPALDLIAFNTFGCIAKEVNRTNVSCGIADLENLEMDSPPDFQLSNLQFSSQDSVFDWIDKL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00910 432 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 40 330 IPR044799 GO:0003700
Pte15g00910 432 Gene3D NAC domain 101 256 IPR036093 GO:0003677|GO:0006355
Pte15g00910 432 ProSiteProfiles NAC domain profile. 92 252 IPR003441 GO:0003677|GO:0006355
Pte15g00910 432 SUPERFAMILY NAC domain 77 252 IPR036093 GO:0003677|GO:0006355
Pte15g00910 432 FunFam NAC domain-containing protein 8 101 256 - -
Pte15g00910 432 Pfam No apical meristem (NAM) protein 93 233 IPR003441 GO:0003677|GO:0006355
Pte15g00910 432 MobiDBLite consensus disorder prediction 270 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00910 Pte-Chr15 6627256 6631165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00910 71 258 NAC Transcription Factor Family AT4G28500 56.021 1.26e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g00910 NAM 9.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00910 - - qsa:O6P43_004700 486.878