Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00861 ATGGAGAGAGCAAAACATATGATCATCAATAGAGGGATCAAATTGCCTGTAGGGTATCGGTTCCGTCCTACTGATGAAGAGCTTGTCGTTTATTATTTGAAGAGGAAGATGCATGCTCTCCCTTTACCAGTTTCTATCATTCCTGAGTTTGATGTGCTTCAAGCTGAACCTTATGGTTTCCCAGGTGATGCGAAAGAAAGGAGGTATTTCTTCAGCATTAGGAAGGAAAGCAGCTTTTCCAAAGCTGGAAAGAGAGTTGCCGGCTCTGGTTATTGGAAATCTACCGGCAAAGAGAAGCCAATCATGGCTGCTGGGAGCAACAGAATAGTGGGCATGAGGAAAAGATTGATTTTTTGTGAATCAAAGGTTTCTCACAATGCCAAAACTAGATGGGTCATGCATGAGTTACGCCTTCAGGACTCGGGAACAACGACCAGATCATATCAGGTGTCCGAGGGGAAGGAAGATTGGGCTGTATATCGTGTATATCAGAAGTCAAGACCTCAGAAGAGGAGCAGCATACTGCTGCACTCTAAGACAAAGAGCTTCGAGATTCTGGAGGAAATCAAACCCAGTTTTATAGATTTTAAGGAGGAAAGCTGCAATGATGATGGAGGTCCTCCACAACCTTCTTCTCCAAGTTGTTGCAGTGAAATCACTTTTAACGAATTAGACCAGGAGGAAAATAGTTCTGCGTCACCATGA 705 0.4369 MERAKHMIINRGIKLPVGYRFRPTDEELVVYYLKRKMHALPLPVSIIPEFDVLQAEPYGFPGDAKERRYFFSIRKESSFSKAGKRVAGSGYWKSTGKEKPIMAAGSNRIVGMRKRLIFCESKVSHNAKTRWVMHELRLQDSGTTTRSYQVSEGKEDWAVYRVYQKSRPQKRSSILLHSKTKSFEILEEIKPSFIDFKEESCNDDGGPPQPSSPSCCSEITFNELDQEENSSASP* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00861 234 MobiDBLite consensus disorder prediction 197 217 - -
Pte15g00861 234 SUPERFAMILY NAC domain 9 165 IPR036093 GO:0003677|GO:0006355
Pte15g00861 234 Gene3D NAC domain 24 169 IPR036093 GO:0003677|GO:0006355
Pte15g00861 234 ProSiteProfiles NAC domain profile. 15 165 IPR003441 GO:0003677|GO:0006355
Pte15g00861 234 PANTHER NAC TRANSCRIPTION FACTOR 56 15 198 - -
Pte15g00861 234 Pfam No apical meristem (NAM) protein 16 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00861 Pte-Chr15 6284537 6286280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00861 1 167 NAC Transcription Factor Family AT5G13180 43.787 5.64e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte15g00861 NAM 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00861 - - qsu:111996957 244.973