Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00858 ATGCAGAACCATGTCATCAACGAATCCAGGAATGATAATCATCTTTTTCATCTGGGCATGGCAATCTACGGCCATTTCCTGCTGCTTCTAAATCCTCAAGCACATTCGGCTCTTAAATTTATTAAAAAATTGTTGAATCGTTGGTGGGCTGGAAATGTGGCAATGAGAGGTGCAGAACCCATGTCATCTTCTCATTTTCTTAACTTGAGGAACCCAGCTGATGAAGATGACCATGGTAGTCAAGAAGCCGTGGAACCGAGTAGCAGTGGTGGTCGGGGACCTCGAGGTCAGCCACCAGGGTCAAAAAATAAACCGGAACCTCCGATAGTGATGACTAAGGAAACCCCCAATGCACTCAAAAGCCATGTGTTGGAAATTAGCATTGGGAGTGATATAGTTGAGAGTATTGCCACCTTTGCAAATCGAAGACACAAGGGGATGTCTGTCCTTAGTAGAAGTAGCATTTTTACAAATGTTACACGAAGACAACCAGTTGCATCAGGTGGGGTGGTTACTCCTCACTAA 525 0.4457 MQNHVINESRNDNHLFHLGMAIYGHFLLLLNPQAHSALKFIKKLLNRWWAGNVAMRGAEPMSSSHFLNLRNPADEDDHGSQEAVEPSSSGGRGPRGQPPGSKNKPEPPIVMTKETPNALKSHVLEISIGSDIVESIATFANRRHKGMSVLSRSSIFTNVTRRQPVASGGVVTPH* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00858 174 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 64 173 IPR014476 GO:0003680
Pte15g00858 174 ProSiteProfiles PPC domain profile profile. 116 174 IPR005175 -
Pte15g00858 174 MobiDBLite consensus disorder prediction 65 116 - -
Pte15g00858 174 Pfam Plants and Prokaryotes Conserved (PCC) domain 121 160 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00858 Pte-Chr15 6251733 6252414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00858 71 174 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 47.826 6.67e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00858 - - mnt:21408059 160.229