Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00856 ATGTCAATGTTGCAGAAATCCTTCCAATTAGATTTGATAAAACTTCAGTATTTACTCTTTGCTGTCAGTTGTTCTACACCCTCTCGCCCGCAGTCGAATCAGTTCCGATCTGTACGAGGCAATATGACTTGCTTTCCATGTTTTGGGTCTTGGAAGCAGTACTATAAGGGTAAGGAGAAATTGGCCAATGCTGTAACGGAGATGGGTGCCAATGCTGGGCACACATTACATTCTGTACGGAGTGCACCTAAAAACTCCTCAGAGCCTCAATTTGATCCACATGTGCAATCTGACGACATTGCTCAAACATTTACGTACCGAGAGCTTGCTGCGGCAACAAAAAATTTCAGGGATGACTACTTCATTGGGCAAGGTGGATTTGGATCTGTCTACCAAGGGAAGCTAATCACGGGTCAGGCTGTTGCTGTTAAGAAACTAGACCCGACAAGTCACCAAGGAGATAGAGAGTTTCTGGTGGAGGTTCTGATGCTTTCTTTTCTGCGTCATCCCAACCTTGTCAATTTGATTGGCTACTGTGCAGAAGGGACCCAAAGACTTCTTGTGTATGAACACATGGCCTTTGGATCATTGGAATTTCATCTCCATGGTCGTTCCCCTGATGAAGAGCCATTGGACTGGAACACGAGGATGATGATTGCTGCTGGGGCAGCGAAGGGGCTGAATTATCTACACAATGAAGCATATCCTCCAGTTATATACAGGGATCTAAAATCAGCTAACATATTACTGACAAATGAGTTCTTTCCAAAACTTTCTGACTTTGGTCTAGCCAAATTCGGTCCAAGTGGAGACAAATCACATGTCTCCACTAGAGTCATGGGAACCTTTGGTTATTGTGCCCCAGAGTATATGGAGACGGGAAAATTGACTCTTAAATCGGACATTTATAGTTTTGGGGTGCTCTTGTTGGAGCTCATCACTGGAAGAAAAGCAATGGACTCGGAACGTGGGCTCGAGAAAGAACTTGTTAGATGGGCACGCCTTCTGCTAGGAGATCGAAGCAAATACTCCGTATTGGTAGACCCAAAATTGCAAGGTCAAATCTCAGAGTCTAGTTTAGCGAAGGTAATACAAGTAACATCTTTGTGTCTCAGAGAAGAAGCCAATACCCGGCCTCAAATAGGTAATGTTATGAAAGCATTAGACTACATAGTTTCCAGGCTACACAAACCAAAGCAGGCTCCTAAGATGAACAGAGGAGGCCAGGAGAATGGTGATTCTACAAAGGAAGCATCACTTATGCGAAATCCAGATCGAGCGCAAGCTGTTGCAGAGGAGTCTTGTACAGGTGAGTCTCATTGA 1323 0.4444 MSMLQKSFQLDLIKLQYLLFAVSCSTPSRPQSNQFRSVRGNMTCFPCFGSWKQYYKGKEKLANAVTEMGANAGHTLHSVRSAPKNSSEPQFDPHVQSDDIAQTFTYRELAAATKNFRDDYFIGQGGFGSVYQGKLITGQAVAVKKLDPTSHQGDREFLVEVLMLSFLRHPNLVNLIGYCAEGTQRLLVYEHMAFGSLEFHLHGRSPDEEPLDWNTRMMIAAGAAKGLNYLHNEAYPPVIYRDLKSANILLTNEFFPKLSDFGLAKFGPSGDKSHVSTRVMGTFGYCAPEYMETGKLTLKSDIYSFGVLLLELITGRKAMDSERGLEKELVRWARLLLGDRSKYSVLVDPKLQGQISESSLAKVIQVTSLCLREEANTRPQIGNVMKALDYIVSRLHKPKQAPKMNRGGQENGDSTKEASLMRNPDRAQAVAEESCTGESH* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00856 440 CDD STKc_IRAK 122 389 - -
Pte15g00856 440 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Pte15g00856 440 MobiDBLite consensus disorder prediction 398 440 - -
Pte15g00856 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Pte15g00856 440 Gene3D Transferase(Phosphotransferase) domain 1 192 411 - -
Pte15g00856 440 FunFam serine/threonine-protein kinase PBS1-like 82 191 - -
Pte15g00856 440 SUPERFAMILY Protein kinase-like (PK-like) 103 400 IPR011009 -
Pte15g00856 440 PANTHER OS07G0668900 PROTEIN 80 399 - -
Pte15g00856 440 Pfam Protein kinase domain 120 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00856 440 ProSiteProfiles Protein kinase domain profile. 116 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00856 440 Gene3D Phosphorylase Kinase; domain 1 78 191 - -
Pte15g00856 440 SMART serkin_6 116 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00856 440 FunFam Serine/threonine-protein kinase PBS1 192 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00856 Pte-Chr15 6246869 6249252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00856 42 432 Glycoside Hydrolase AT3G07070 51.111 2.66e-131 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte15g00856 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00856 - K13430 qsa:O6P43_009734 446.047