Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00855 ATGCATGCAATGGAGATGCTCAGCGATCTTAAGAACAGTTTTGCTCGCAAACAAGATGTCGAACCCAATGATCAGAATGCTGCTGATTCTGCAGACCAAACTCAAGATGACACGGCAGACCAGCAAAATCCAACCTCACCAATTGATGATGATAATGCAGACCAAGAAAACCAAAAGGAGGAGGAGGTGGCAGATCGCGATGAGGAGACTCCCACTACAGATGAAAAGTCTCCTATTGCAGAAAACACTCCTTACAGCTTCGAATCTGTTTCTTCGGACGTTGATCTATTCGTGGAAACTCTGCAGCAGTACAATGAGGACGAGCCTGAATTCGAGATCCCTCGATTCGTTGAAAGGTTCTTGGATCTTTTCGAAGAGAAGGTGTCCAAGAAGGAAACCATGGGAGATGAAAAGTTAAAGTGGAATCATGAAACAGAACATGACTCTCTGTTCCTTGAATCTCTTGATCGTGTTTCGAGGCTTGAGAAAGCTTTGAAACGAACTTCTGATTCTGAAGAGATTAAACCAGAACAGAAGGCTTATCTGGTTAACCGCATCTGTTTGACTCAGCATCGAGCCATGTTGTGTTTGGAGGAGGAGTTTCGTCTTCTTCTTGAAGATTATCCTCATGATCCGAAAAAGAAACAATCCAATATTGCAGAACAAGAGCATGGTGCGTCTTCCGAAACGGACCGTGAAAATTTCTATCCGGATTACCCGGGTTATCCTGAAGACGTTGTCGCAAATCTAACCAAATTGGCGAAGCATATGTTCACCGGAGGCTATGAGGCTGAGTGCTGTCAAGTTTACGTGGTCGCTAGAAGGCATGCATTTGAAGAGGCTCTGCATAAACACCAAGGGTTTGAGAATCACAGCATCGACGAGCTTCACAAAATGCAGTGGGAACCATTAGAACGTGAGATCACGACGTGGATGAACACAGCGAAGGCATGCACCTCTGTTTATCTCCGGGGAGAACGCAAACTCGTTGACTCGGTCTTCTCCGATCACCCGAGGATTTCAACTGGACTCTTCTGCAACCTTGTTTCTGGGGTTCTCATACGTTTGCTCAATTTCGCTGAAGGTGTTACCATGACCAAACGTTCTGCCGAGAAACTGTTCAAATTTATTGACATTTATGAGACACTCCGTGACATCGTTCCTATCTTGGGTGAGCTGTTCCCTGAGAAGTGTCTGGATGAACTCAAGGCAGAGGTCACATTATGTAGGTGCCACGTCGGCGAGACGGCGGTGCTCATATTCTGTGGTTTGGAGAACTCCATAAAATCTGATGCTGGAAAAACTCCGGTGCCCGGTGGTGCGGTTCATCCTTTGAATCGCTACACCATGAACTACCTCAAGTATGCTTGTGAATATAAGGACACATTGGAGCAGATTTTCAAGGAGCACTCTAAATTTGAACGTGCTGATTCTACAAGTAGGCCTCGTGGTGAAGGAGATCAAGGACATAATTACGATGCAAGTAATAGCAACAACAATGGTGACGATAAAGAATCGTCTCCATTCTCGATGCAATTAATGAGGGTGATGGAGTTGTTAGACGCTAACCTGGAAGCCAAAGCAAAGCTGTACAGAGATGTATCATTGAGCTGCATCTTTATGATGAACAACGGGCGTTATATCCTGCAAAAGATTAAGGGGTCTGCAGAGATTCATGCACTAATGGGAAACACGTGGTGCAGAAGGAGGTCATCCGATCTCAGACAATACCATAAGAATTATCAAAGGGAAACTTGGAGCAAACTGTTGGGTTGGTTGAACCATGAGGGATTGACTTCTCATGGTAAGGTGATGAAGCCAGTGTTGAAGGAAAGGTTCAAAGGGTTCAATGCAATGTTTGAAGAAATACACAGGACACAGAGCTCGTGGGTGGTGAGTGATGAACAGCTTCAATCAGAGCTTCGTGTTTCAATATCAGCAGTAGTGATTCCTGCATACAGATCATTCTTGGGGAGGTTCGCACAGGTTTTGGACCCAGGAAGACAAACAGAGAAGTATATAAAGTTTCAACCTGAAGATATAGAGAATTACATTGATGAGCTATTCGATGGCCCAACATCCATGGCCAGGAGGAGACAATGA 2103 0.4489 MHAMEMLSDLKNSFARKQDVEPNDQNAADSADQTQDDTADQQNPTSPIDDDNADQENQKEEEVADRDEETPTTDEKSPIAENTPYSFESVSSDVDLFVETLQQYNEDEPEFEIPRFVERFLDLFEEKVSKKETMGDEKLKWNHETEHDSLFLESLDRVSRLEKALKRTSDSEEIKPEQKAYLVNRICLTQHRAMLCLEEEFRLLLEDYPHDPKKKQSNIAEQEHGASSETDRENFYPDYPGYPEDVVANLTKLAKHMFTGGYEAECCQVYVVARRHAFEEALHKHQGFENHSIDELHKMQWEPLEREITTWMNTAKACTSVYLRGERKLVDSVFSDHPRISTGLFCNLVSGVLIRLLNFAEGVTMTKRSAEKLFKFIDIYETLRDIVPILGELFPEKCLDELKAEVTLCRCHVGETAVLIFCGLENSIKSDAGKTPVPGGAVHPLNRYTMNYLKYACEYKDTLEQIFKEHSKFERADSTSRPRGEGDQGHNYDASNSNNNGDDKESSPFSMQLMRVMELLDANLEAKAKLYRDVSLSCIFMMNNGRYILQKIKGSAEIHALMGNTWCRRRSSDLRQYHKNYQRETWSKLLGWLNHEGLTSHGKVMKPVLKERFKGFNAMFEEIHRTQSSWVVSDEQLQSELRVSISAVVIPAYRSFLGRFAQVLDPGRQTEKYIKFQPEDIENYIDELFDGPTSMARRRQ* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00855 700 PANTHER EXOCYST COMPLEX PROTEIN EXO70 121 691 IPR004140 GO:0000145|GO:0006887
Pte15g00855 700 Gene3D Exocyst complex component Exo70 134 699 - -
Pte15g00855 700 MobiDBLite consensus disorder prediction 212 231 - -
Pte15g00855 700 MobiDBLite consensus disorder prediction 24 51 - -
Pte15g00855 700 MobiDBLite consensus disorder prediction 474 507 - -
Pte15g00855 700 Pfam Exo70 exocyst complex subunit 310 687 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte15g00855 700 MobiDBLite consensus disorder prediction 212 235 - -
Pte15g00855 700 MobiDBLite consensus disorder prediction 490 507 - -
Pte15g00855 700 MobiDBLite consensus disorder prediction 1 87 - -
Pte15g00855 700 SUPERFAMILY Cullin repeat-like 151 690 IPR016159 -
Pte15g00855 700 MobiDBLite consensus disorder prediction 474 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00855 Pte-Chr15 6225211 6227313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00855 20 699 EXO70 exocyst subunit family AT5G13990 49.378 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00855 K07195 - qsa:O6P43_006071 784.252