Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00853 ATGATCAATTCACTTTGCGGAAGCATGGGGTCACTCAAGAGTGAGAGTCCACTTGTCAAAGCACAACCGACTTCTTCCAATGAGTCATCGGCTTCTGAGTCAAAGAAGAGTGCCAGTGCTTCTTGTGAAATGGAGCTAAATTCTTTAACCCCACCAAGTCTAAGCCTCCATGGACGCAAGTATGATCATCTGGAAGGAGAGGCCGAAGTCCAATCACCTGATAACTCATTGTGGGAGTCATTCTTCTCCGATCAATTAGAGACTGATTTTATGATCTGTTCACCTGTCAGAAATGCGTCTTCACCTCAGAGTTCTCTGTACAATAACTATAACTATGTTCAAGCAATGCAAGGGCAGAGTGTTTCTGGGTGCTCCCCTCCTCGGTTTTCTTCTCAGATTGGTTCATATACAAGTAGCCTTAAAGGGAAGGGACTAAGCCCACTTCACAAGGTCTTCAACTCTCCAGATAATCAGTATATGCAGTCCATCGAAGGTCTTTCCTTGCCCGTAATTGAGGAGTTTCTGGAGGATTATCACAAAGATGGATTAGAAGGACAATTCTCCTCATCCAAATTGTCTGATCATATTGGGAGTTCGCGTAGCTTTGACACTCCAAGTAGGATCCCGTCCATGCTGGACATGGTGACGTCAAACTCATCAGGATTTTGTGGATCAGCAAGTGATACAGCTTCACCATATGGAGATAGTTCTCAACTTTCTCAAGAGAGTGACGTTAATTATAAGGTGGGGTCTATTGGAAATAGTAAGCCACTCTTTGAAGCCTTGAAACAAGAACGCCAGCAGGAGAAGCAGCAGCGAAGACATCATCAGCGGCAACCCCTACCCCAACAAGACAAAAGTGTTAGCCAAAGCTTGACGGTCCCTCTTTCCATTGATACAGAACAGGAGCAAGACAGTGGGCTACAATTGGTGCATCTTCTTCTAGCTTGTGCTGAAGCAGTGGCCAAAGAGGACTACATGCTAGCAAGAAGGTACCTACACCATCTGAACCGTGTAGTCACACCTCTAGGAGACTCCATGCAACGTGTGGCCTCTTGTTTCACTGAAGCCTTAAGCGCAAGACTGGCTGCAACCCTCACAACAAACCCCAGTACATCCGGTGTTCCAAAATCACACTTTACTACTTTCCCTCCAAACTCTCTAGAAATTCTCAAAATCTACCAGATTGTCTATCAGGCCTGCCCTTACGTAAAGTTTGCACACTTCACCGCCAATCAGGCAATATTCGAAGCCTTTGAAGCAGAAGAACGAGTCCATGTTATTGACCTAGATATCCTCCAAGGTTATCAATGGCCTGCTTTCATGCAAGCCTTAGCAGCTAGACCTGGTGGAGCTCCATTTCTGCGGATAACTGGTGTTGGACCCTCTATAGAATCTGTGAAAGAGACAGGTAGGTGTTTGACTGAATTAGCTCATTCTCTGCACGTCCCTTTTGAATTTCATCCAGTTGGCGAACAACTCGAAGACCTAAAGCCACACATGTTTCACCGACGAGTTGGTGAAGCCTTGGCAGTTAACTCCGTCAACCGGTTCCACCGTGTCCCGCTGAACTGCTTAGGAAACTTACTAGCAATGATAAGAGATCAAGCCCCTAAGATATTTACCTTAGTGGAACAAGAAGCAAGCCATAACGGCCCGTATTTTCTAGGAAGATTTCTAGAGGCACTGCACTATTACTCTGCGATATTTGATTCATTGGATGCAACTTTCCCCCCTGACTCTGCACAAAGGGCAAAGGTTGAGCAGTATATATTTGCCCCCGAGATAAGGAACATAGTGGCATGTGAAGGAGCAGAGAGAATCGAAAGGCACGAGAGGTTAGAGAAATGGAGGAAGATAATGGAAGGGAAAGGTTTCGAAGGGGTTCAACTGAGTGCAAATGCAGTGACCCAGTCAAAGATATTGCTGGGTTTATATTCATGTGAAGGATATAAACTGACAGAGGACAAGGGTTGCTTGTTATTGGGTTGGCAAGATCGAGCTCTAGTAGCTGCCTCTGCATGGAGGTGCTGA 2034 0.4567 MINSLCGSMGSLKSESPLVKAQPTSSNESSASESKKSASASCEMELNSLTPPSLSLHGRKYDHLEGEAEVQSPDNSLWESFFSDQLETDFMICSPVRNASSPQSSLYNNYNYVQAMQGQSVSGCSPPRFSSQIGSYTSSLKGKGLSPLHKVFNSPDNQYMQSIEGLSLPVIEEFLEDYHKDGLEGQFSSSKLSDHIGSSRSFDTPSRIPSMLDMVTSNSSGFCGSASDTASPYGDSSQLSQESDVNYKVGSIGNSKPLFEALKQERQQEKQQRRHHQRQPLPQQDKSVSQSLTVPLSIDTEQEQDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLTTNPSTSGVPKSHFTTFPPNSLEILKIYQIVYQACPYVKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPSIESVKETGRCLTELAHSLHVPFEFHPVGEQLEDLKPHMFHRRVGEALAVNSVNRFHRVPLNCLGNLLAMIRDQAPKIFTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGKGFEGVQLSANAVTQSKILLGLYSCEGYKLTEDKGCLLLGWQDRALVAASAWRC* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00853 677 MobiDBLite consensus disorder prediction 1 58 - -
Pte15g00853 677 MobiDBLite consensus disorder prediction 263 281 - -
Pte15g00853 677 ProSiteProfiles GRAS family profile. 301 676 IPR005202 -
Pte15g00853 677 MobiDBLite consensus disorder prediction 1 54 - -
Pte15g00853 677 MobiDBLite consensus disorder prediction 263 291 - -
Pte15g00853 677 Coils Coil 259 279 - -
Pte15g00853 677 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 261 672 IPR005202 -
Pte15g00853 677 MobiDBLite consensus disorder prediction 223 244 - -
Pte15g00853 677 MobiDBLite consensus disorder prediction 187 208 - -
Pte15g00853 677 Pfam GRAS domain family 310 676 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00853 Pte-Chr15 6214897 6217061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00853 288 677 GRAS Transcription Factor Family AT1G66350 43.291 4.20e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte15g00853 GRAS 7.5e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00853 - - pvy:116129935 954.51