Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00848 ATGAGTGAGAGTAAGCAAGCATCTGAAACAAAAGATTTACAGATTGTTGCTGCAGAAAAAGATGAGACCAACAAGAAGCAATTGGCTCCCAAGAGGACTATAAACAAGGACAGGCACACCAAGGTTGAAGGCAGGGGAAGGAGGATAAGGATGCCAGCTTTATGTGCAGCTAGGATTTTCCAGTTGACCAGAGAATTGGGACACAAATCGGACGGTGAGACTATACAGTGGCTTTTGCAACAGGCGGAGCCATCGATAATTGCGGCGACAGGAACAGGAACTATACCAGCATCTGCTCTGGCAGCTGCAGGAAGCTCTGTTTCTCAACAAGGGACTCCTCTATCTGCTGGATTACATCAGAAAATTGATGAACTAGGCGGGTCCAGTATCGGGTCAGCTGGTAGGACCAGCTGGAATATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACAGGTTTATGGCCCCCGTCTGTAAGTGGGTTCGGCTTTCATTCGTCATCTGGGCCGTCAACGACGAGTTTGGTAACTGAGAGTTCAACTTATCTGCAGAAGTTGGGATTTACTGGTTTTGACTTGCCAGGAGCTAACATGAGTCCTATGAGTTTCACATCGATCTTAGGAGGGGGCAATCAGCAGATGCCTGGTTTAGAACTTGGGTTGTCTCAGGATGGCAGTCATATTGGCGTTCTCAACCCACAAACCTTAAATCAGATTTATCAGCAGATGGGTCAGGCTAGAATGCACCAGCAATATGAAACTCAACATGAGTATCAGCCTCCTCCTTCTAAGGACGATTCTCAAGGCTCTGGACAGTAG 819 0.4786 MSESKQASETKDLQIVAAEKDETNKKQLAPKRTINKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGSSVSQQGTPLSAGLHQKIDELGGSSIGSAGRTSWNMVGGNLGRPHVATGLWPPSVSGFGFHSSSGPSTTSLVTESSTYLQKLGFTGFDLPGANMSPMSFTSILGGGNQQMPGLELGLSQDGSHIGVLNPQTLNQIYQQMGQARMHQQYETQHEYQPPPSKDDSQGSGQ* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00848 272 Pfam TCP family transcription factor 35 115 IPR017887 -
Pte15g00848 272 MobiDBLite consensus disorder prediction 14 28 - -
Pte15g00848 272 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 115 IPR005333 GO:0003700
Pte15g00848 272 MobiDBLite consensus disorder prediction 243 272 - -
Pte15g00848 272 MobiDBLite consensus disorder prediction 1 28 - -
Pte15g00848 272 ProSiteProfiles TCP domain profile. 35 89 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00848 Pte-Chr15 6172404 6173222 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00848 5 273 TCP Transcription Factor Family AT3G27010 59.441 6.91e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte15g00848 TCP 1.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00848 - - pvy:116145555 407.912